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The map label for this gene is ypfJ [H]

Identifier: 157371743

GI number: 157371743

Start: 3882121

End: 3882987

Strand: Reverse

Name: ypfJ [H]

Synonym: Spro_3506

Alternate gene names: 157371743

Gene position: 3882987-3882121 (Counterclockwise)

Preceding gene: 157371744

Following gene: 157371742

Centisome position: 71.26

GC content: 57.9

Gene sequence:

>867_bases
ATGCGTTGGCAAGGGCGTCGGGAAAGTGACAATGTTGAGGATCGTCGCGGGCAGTCTTCAGGTCTGGGTGGCGGCGGTGG
CGGTTTCCGCGTGCCTCGCGGCAAGGGCGGTATCGCCATTCTGGTGGTGGTGTTGGTGGCCGGCTATTACGGCATCGATC
TTTCACCGCTGTTGAACGGCGGGGATGTTAGCCCGCAAACACAGCAACAGAGCGCCAGCATCAGTCCAAAAGACGATGAG
CTGGCCAAATTTACTTCGGTGGTGCTGGCCTCTACCGAAGATAACTGGAAAGAAGTTTTCCAGCGCATGGGTAAAACCTA
TCAGCCACCCAAATTGGTGATGTATCGCGGCGTAACGCGTACCAGCTGCGGCACCGGTCAGGCGGCGATGGGGCCTTTCT
ACTGCCCGGGCGACAAAACGGTGTATATCGACCTGTCGTTCTATCAGGATATGAAAACCAAACTGGGTGCCGGCGGTGAC
TTCGCCCAGGCCTATGTGGTGGCGCACGAGGTGGGTCACCATGTGCAGAACCTGTTGGGCATTGAGCCTAAAGTGCGTCA
AATGCAGCAGGGTGCCAGCCAGGCAGAAGTGAATCGTCTGTCGGTGAAAATGGAACTGCAGGCGGACTGCTTTGCCGGCG
TGTGGGGCAAATATGCCGAGAAGCAGCAAATGTTGGAAGAGGGCGACCTGCAGGCGGCATTGAACGCTGCGCAGGCGATC
GGCGACGATCGTTTGCAGCAACAAGGGCAGGGGCGCGTGGTACCGGACAGCTTCACCCACGGGACTTCACAGCAGCGCTA
TACCTGGTTTAAACAGGGCTTCGACAGCGGTGACCCTAACACCTGCAATACCTTCGCATCCCGTTAA

Upstream 100 bases:

>100_bases
CCTTCTGTCTGCATTTCCAGAAAAATTCTACATTTCCTTTGCCGCTGAGCATTTATAATGATCTAAGTAACATGACAAAA
ACCTAATCTGGAGTTTACTT

Downstream 100 bases:

>100_bases
CATGCATGCCGGAGCCTGACTCCGGCATTATGTTGTTGACAAAGTGGGGAAAAAGCGTGGTTTTTCCCCACTTTGTGGCT
ATCAGCCGAAAATCAATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MRWQGRRESDNVEDRRGQSSGLGGGGGGFRVPRGKGGIAILVVVLVAGYYGIDLSPLLNGGDVSPQTQQQSASISPKDDE
LAKFTSVVLASTEDNWKEVFQRMGKTYQPPKLVMYRGVTRTSCGTGQAAMGPFYCPGDKTVYIDLSFYQDMKTKLGAGGD
FAQAYVVAHEVGHHVQNLLGIEPKVRQMQQGASQAEVNRLSVKMELQADCFAGVWGKYAEKQQMLEEGDLQAALNAAQAI
GDDRLQQQGQGRVVPDSFTHGTSQQRYTWFKQGFDSGDPNTCNTFASR

Sequences:

>Translated_288_residues
MRWQGRRESDNVEDRRGQSSGLGGGGGGFRVPRGKGGIAILVVVLVAGYYGIDLSPLLNGGDVSPQTQQQSASISPKDDE
LAKFTSVVLASTEDNWKEVFQRMGKTYQPPKLVMYRGVTRTSCGTGQAAMGPFYCPGDKTVYIDLSFYQDMKTKLGAGGD
FAQAYVVAHEVGHHVQNLLGIEPKVRQMQQGASQAEVNRLSVKMELQADCFAGVWGKYAEKQQMLEEGDLQAALNAAQAI
GDDRLQQQGQGRVVPDSFTHGTSQQRYTWFKQGFDSGDPNTCNTFASR
>Mature_288_residues
MRWQGRRESDNVEDRRGQSSGLGGGGGGFRVPRGKGGIAILVVVLVAGYYGIDLSPLLNGGDVSPQTQQQSASISPKDDE
LAKFTSVVLASTEDNWKEVFQRMGKTYQPPKLVMYRGVTRTSCGTGQAAMGPFYCPGDKTVYIDLSFYQDMKTKLGAGGD
FAQAYVVAHEVGHHVQNLLGIEPKVRQMQQGASQAEVNRLSVKMELQADCFAGVWGKYAEKQQMLEEGDLQAALNAAQAI
GDDRLQQQGQGRVVPDSFTHGTSQQRYTWFKQGFDSGDPNTCNTFASR

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=285, Percent_Identity=75.4385964912281, Blast_Score=441, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31388; Mature: 31388

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWQGRRESDNVEDRRGQSSGLGGGGGGFRVPRGKGGIAILVVVLVAGYYGIDLSPLLNG
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
GDVSPQTQQQSASISPKDDELAKFTSVVLASTEDNWKEVFQRMGKTYQPPKLVMYRGVTR
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEECCCCC
TSCGTGQAAMGPFYCPGDKTVYIDLSFYQDMKTKLGAGGDFAQAYVVAHEVGHHVQNLLG
CCCCCCCCCCCCEECCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
IEPKVRQMQQGASQAEVNRLSVKMELQADCFAGVWGKYAEKQQMLEEGDLQAALNAAQAI
CCHHHHHHHCCCHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GDDRLQQQGQGRVVPDSFTHGTSQQRYTWFKQGFDSGDPNTCNTFASR
CHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MRWQGRRESDNVEDRRGQSSGLGGGGGGFRVPRGKGGIAILVVVLVAGYYGIDLSPLLNG
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
GDVSPQTQQQSASISPKDDELAKFTSVVLASTEDNWKEVFQRMGKTYQPPKLVMYRGVTR
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEECCCCC
TSCGTGQAAMGPFYCPGDKTVYIDLSFYQDMKTKLGAGGDFAQAYVVAHEVGHHVQNLLG
CCCCCCCCCCCCEECCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
IEPKVRQMQQGASQAEVNRLSVKMELQADCFAGVWGKYAEKQQMLEEGDLQAALNAAQAI
CCHHHHHHHCCCHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GDDRLQQQGQGRVVPDSFTHGTSQQRYTWFKQGFDSGDPNTCNTFASR
CHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]