Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is yfcZ [H]
Identifier: 157371617
GI number: 157371617
Start: 3741418
End: 3741714
Strand: Reverse
Name: yfcZ [H]
Synonym: Spro_3380
Alternate gene names: 157371617
Gene position: 3741714-3741418 (Counterclockwise)
Preceding gene: 157371619
Following gene: 157371616
Centisome position: 68.67
GC content: 50.51
Gene sequence:
>297_bases ATGTCAAATTCACTTAATAAATGTAGCGCCCAGGAAACTGCCGCTTGTTGCTGTGTTGACGTTGGCACCGTCATGGACAA TACCGATTGCACCGCGTCCTACAGCCAGGTGTTTACCAATCAGCAGGATGCAGAGAAAATGTTGGCCGCGTTGACTGAAA AAGCCCGGGGTGTGGAATCTGACCCTTGCGACATCAGCAGTAGCATTAAACCGGTTGACGGTGGTGTAGAACTGGTGGCT GATTTCACCTTTGCCTGCCAGGCAGAAACCTTTATTTTCCAGCTCGGCCTGCGTTAA
Upstream 100 bases:
>100_bases TCGCCACAGAGTAAAATAGACACAGAATCTTGTATCTTTGCGCCAGCGTTTAAATGGCAATTTGGATGCGCGTAATGGCG GTCCCTGAGGAGAATTAACC
Downstream 100 bases:
>100_bases TTGCTGCTTTAAAAGGGTGCGGGACTTACCCGCATCTTCACCTGTCCCATAATCCCTCCCTGGAAAGTTGCTCCTGCTCT CAGTTTTCGCTTCTGACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSNSLNKCSAQETAACCCVDVGTVMDNTDCTASYSQVFTNQQDAEKMLAALTEKARGVESDPCDISSSIKPVDGGVELVA DFTFACQAETFIFQLGLR
Sequences:
>Translated_98_residues MSNSLNKCSAQETAACCCVDVGTVMDNTDCTASYSQVFTNQQDAEKMLAALTEKARGVESDPCDISSSIKPVDGGVELVA DFTFACQAETFIFQLGLR >Mature_97_residues SNSLNKCSAQETAACCCVDVGTVMDNTDCTASYSQVFTNQQDAEKMLAALTEKARGVESDPCDISSSIKPVDGGVELVAD FTFACQAETFIFQLGLR
Specific function: Unknown
COG id: COG3691
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0381 family [H]
Homologues:
Organism=Escherichia coli, GI87082087, Length=94, Percent_Identity=64.8936170212766, Blast_Score=130, Evalue=2e-32, Organism=Escherichia coli, GI1790357, Length=100, Percent_Identity=40, Blast_Score=78, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005272 [H]
Pfam domain/function: PF04175 DUF406 [H]
EC number: NA
Molecular weight: Translated: 10444; Mature: 10313
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 7.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSLNKCSAQETAACCCVDVGTVMDNTDCTASYSQVFTNQQDAEKMLAALTEKARGVES CCCCCCCCCCHHHHHHHHEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCC DPCDISSSIKPVDGGVELVADFTFACQAETFIFQLGLR CCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHEEECCC >Mature Secondary Structure SNSLNKCSAQETAACCCVDVGTVMDNTDCTASYSQVFTNQQDAEKMLAALTEKARGVES CCCCCCCCCHHHHHHHHEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCC DPCDISSSIKPVDGGVELVADFTFACQAETFIFQLGLR CCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]