Click here to switch to the map view.

The map label for this gene is yfcA [H]

Identifier: 157371609

GI number: 157371609

Start: 3732379

End: 3733179

Strand: Reverse

Name: yfcA [H]

Synonym: Spro_3372

Alternate gene names: 157371609

Gene position: 3733179-3732379 (Counterclockwise)

Preceding gene: 157371610

Following gene: 157371608

Centisome position: 68.51

GC content: 58.93

Gene sequence:

>801_bases
ATGGATTGGTTCGTCGTTGGCCCCGAGATGCTCGGGGTTTTGTTTGTGGTGGCATTGCTGGCGGGCTTTATCGACTCCAT
TGCCGGTGGGGGGGGGTTGTTGACCGTACCGGCACTGCTGGCGGTGGGAGTGTCTCCCGCGCAGGCGCTGGCAACCAATA
AACTGCAGTCGGTGGGTGGTTCCTTATCCGCCAGCCTGTACTTCATCCGCCGACGAGCCGTTGATCTCAACGATCAAAAG
CTGACAATTCTGTTGGCGCTGATCGGTTCTGTCGCCGGGGCGATCCTGGTGCAGCACATGCGAGCCGATCTGCTACGGCA
AATGTTGCCGTTACTGGTGATCGGCATCGGCCTGTACTTTCTGCTGACCCCGCGTCTGGGGGAGAGTGACCGACAGCGTC
GTTTGAGTGCCTTGCCGTTCGGGCTGGTGGCCGGGGGCTGCGTGGGCTTTTATGACGGCTTCTTTGGCCCTGGCGCCGGT
TCCTTCTACGCGCTGGCCTATGTGACGCTGTGCGGCTTTAACCTGGCCAAATCCACCGCTCACGCCAAGGTGCTGAACTT
CACTTCCAATTTTGGCAGCCTGGTGTTGTTTATCATCGGCGGCAAAGTAGTGTGGAGTATCGGTCTGGTGATGCTGGTAG
GGCAGGTGCTGGGGGCGCGCCTCGGGGCGCATATGGTGATGACCCGTGGGCAAAAGCTGATCCGCCCGATGATCGTCATC
GTTTCTCTGGTGATGAGCTGCAAGCTGTTGTACGACAATCACGGTACGGAAATTCAGCAGTGGCTGGCGCTGCATTTTTA
G

Upstream 100 bases:

>100_bases
TCCGCATCAGCCGAGTGCCAAGCCGGGTAAACCGGTACCGCCGCCATTACCGCCTACCTGTCAGGCTTTGCTGAATAACC
ATTTCGCTGCGGAATAATAA

Downstream 100 bases:

>100_bases
CATGCCAAGCGAGCGGTAACATGAAATAATTACCGCTTTATTTTTGTGGTTATTGGATTTGTTTATGTCAGACACACAGG
CTACCCATCAATACGAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MDWFVVGPEMLGVLFVVALLAGFIDSIAGGGGLLTVPALLAVGVSPAQALATNKLQSVGGSLSASLYFIRRRAVDLNDQK
LTILLALIGSVAGAILVQHMRADLLRQMLPLLVIGIGLYFLLTPRLGESDRQRRLSALPFGLVAGGCVGFYDGFFGPGAG
SFYALAYVTLCGFNLAKSTAHAKVLNFTSNFGSLVLFIIGGKVVWSIGLVMLVGQVLGARLGAHMVMTRGQKLIRPMIVI
VSLVMSCKLLYDNHGTEIQQWLALHF

Sequences:

>Translated_266_residues
MDWFVVGPEMLGVLFVVALLAGFIDSIAGGGGLLTVPALLAVGVSPAQALATNKLQSVGGSLSASLYFIRRRAVDLNDQK
LTILLALIGSVAGAILVQHMRADLLRQMLPLLVIGIGLYFLLTPRLGESDRQRRLSALPFGLVAGGCVGFYDGFFGPGAG
SFYALAYVTLCGFNLAKSTAHAKVLNFTSNFGSLVLFIIGGKVVWSIGLVMLVGQVLGARLGAHMVMTRGQKLIRPMIVI
VSLVMSCKLLYDNHGTEIQQWLALHF
>Mature_266_residues
MDWFVVGPEMLGVLFVVALLAGFIDSIAGGGGLLTVPALLAVGVSPAQALATNKLQSVGGSLSASLYFIRRRAVDLNDQK
LTILLALIGSVAGAILVQHMRADLLRQMLPLLVIGIGLYFLLTPRLGESDRQRRLSALPFGLVAGGCVGFYDGFFGPGAG
SFYALAYVTLCGFNLAKSTAHAKVLNFTSNFGSLVLFIIGGKVVWSIGLVMLVGQVLGARLGAHMVMTRGQKLIRPMIVI
VSLVMSCKLLYDNHGTEIQQWLALHF

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=262, Percent_Identity=71.7557251908397, Blast_Score=376, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 28304; Mature: 28304

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]