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The map label for this gene is ybiF [C]

Identifier: 157371583

GI number: 157371583

Start: 3702080

End: 3703075

Strand: Reverse

Name: ybiF [C]

Synonym: Spro_3346

Alternate gene names: 157371583

Gene position: 3703075-3702080 (Counterclockwise)

Preceding gene: 157371585

Following gene: 157371582

Centisome position: 67.96

GC content: 56.73

Gene sequence:

>996_bases
ATGTCATTACCATCGGGTGTTTCAGTCAGGCCGGTTTTCCCCGGCGCGCGCATTTTACAGGGCAGCAGTCAGGGTTATGT
GATTGCCATTATCAGCGCCATGTTGCTGGCCTTTACCGCCATTATTATCCGCGTGTTGACGCAGTATTATCACCTGCCGA
CCTTTGTGCTGGCCTTTTGGCGAGCGGCATTGGTGGCGCTGGTTTTATTACCGGCGTTGTTGCTGTTCAAGCCTGAGTGG
GCACGCTTACGGCGTTCCCAGATCCCGTTTTATGCCTGTTATGGCCTGCTGTTGGCGGTATTCAACAGCCTGTGGACGCT
GTCGGTGGCGCTGAACGGCGCGTCGGTGGCGACCATCCTGACTTACTGCTCGGTGGGTTTTACCGTCTTCCTCGGCTGGA
TGATCTACAGCGAACGCCTGAACCTGCGCCAGTTGGTGGTGATTGTTGTCAGCCTGGGCGGCTGTTTTCTGGTCAGCAAC
GGTGACAGCATGGGCAACAGCCATTTCAACCTGCTGGGGTTGTTGGTCGGTATGCTGTCCGGCATCGGTTATACCCTCTA
CACGCTGGGCGGACGGGTGGCGACTGAACGCCATTATCCGGTGTGGAATACCATTTTGTACGTGTTCGGTTTTTCCGCCG
TCTATCAGTGGCTGTTCAACATTGCGCTGACGTTATACCCGCTGGCGGCATTCCACGGCATGACCGGTTCTTTGTGGTTC
CTTTCCGAGGGCGTTCAGGGCATCGAGTGGCGCGGTTGGTTGTTGCTGTTGACGCTGGCCGCAGGCCCGACGCTGTTGGG
GTTTGGTTTGTACAACATCAGCCTGAAAACCCTGCCGCTGGCGGTAGCGAACCTGATTTTGTCGCTGGAGTTGGTGTTCA
CGGCGGTGATCGCCTATTTCCTGCTGGGGGAAAACATGAACTCGTTACAACTGCTCGGCAGCGCCCTGGTGATGGGCGGG
GTGCTGATGTTGAAAAACAAGACGGCCGAGGCCTGA

Upstream 100 bases:

>100_bases
GTGGCCTGTATAACATCGGGGGAAAGTGGCTCTGGCGGCAAAATCGCGCGGCGTTAGAATCTCTGCCTGAGTCTATTACC
GCCGTTTTTTTGAGGGTGTC

Downstream 100 bases:

>100_bases
TTTGTTAGCATTATGCCGAGATTTGGAGGCAATAATGACCAATAACCCAAGATTAAAACGGGCGTTAATCGCTTAGTCCG
GCAGTGTTTTGCGACCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MSLPSGVSVRPVFPGARILQGSSQGYVIAIISAMLLAFTAIIIRVLTQYYHLPTFVLAFWRAALVALVLLPALLLFKPEW
ARLRRSQIPFYACYGLLLAVFNSLWTLSVALNGASVATILTYCSVGFTVFLGWMIYSERLNLRQLVVIVVSLGGCFLVSN
GDSMGNSHFNLLGLLVGMLSGIGYTLYTLGGRVATERHYPVWNTILYVFGFSAVYQWLFNIALTLYPLAAFHGMTGSLWF
LSEGVQGIEWRGWLLLLTLAAGPTLLGFGLYNISLKTLPLAVANLILSLELVFTAVIAYFLLGENMNSLQLLGSALVMGG
VLMLKNKTAEA

Sequences:

>Translated_331_residues
MSLPSGVSVRPVFPGARILQGSSQGYVIAIISAMLLAFTAIIIRVLTQYYHLPTFVLAFWRAALVALVLLPALLLFKPEW
ARLRRSQIPFYACYGLLLAVFNSLWTLSVALNGASVATILTYCSVGFTVFLGWMIYSERLNLRQLVVIVVSLGGCFLVSN
GDSMGNSHFNLLGLLVGMLSGIGYTLYTLGGRVATERHYPVWNTILYVFGFSAVYQWLFNIALTLYPLAAFHGMTGSLWF
LSEGVQGIEWRGWLLLLTLAAGPTLLGFGLYNISLKTLPLAVANLILSLELVFTAVIAYFLLGENMNSLQLLGSALVMGG
VLMLKNKTAEA
>Mature_330_residues
SLPSGVSVRPVFPGARILQGSSQGYVIAIISAMLLAFTAIIIRVLTQYYHLPTFVLAFWRAALVALVLLPALLLFKPEWA
RLRRSQIPFYACYGLLLAVFNSLWTLSVALNGASVATILTYCSVGFTVFLGWMIYSERLNLRQLVVIVVSLGGCFLVSNG
DSMGNSHFNLLGLLVGMLSGIGYTLYTLGGRVATERHYPVWNTILYVFGFSAVYQWLFNIALTLYPLAAFHGMTGSLWFL
SEGVQGIEWRGWLLLLTLAAGPTLLGFGLYNISLKTLPLAVANLILSLELVFTAVIAYFLLGENMNSLQLLGSALVMGGV
LMLKNKTAEA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36167; Mature: 36035

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPSGVSVRPVFPGARILQGSSQGYVIAIISAMLLAFTAIIIRVLTQYYHLPTFVLAFW
CCCCCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAALVALVLLPALLLFKPEWARLRRSQIPFYACYGLLLAVFNSLWTLSVALNGASVATIL
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHH
TYCSVGFTVFLGWMIYSERLNLRQLVVIVVSLGGCFLVSNGDSMGNSHFNLLGLLVGMLS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHH
GIGYTLYTLGGRVATERHYPVWNTILYVFGFSAVYQWLFNIALTLYPLAAFHGMTGSLWF
CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LSEGVQGIEWRGWLLLLTLAAGPTLLGFGLYNISLKTLPLAVANLILSLELVFTAVIAYF
HHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGENMNSLQLLGSALVMGGVLMLKNKTAEA
HHCCCCHHHHHHHHHHHHCCCCEEECCCCCC
>Mature Secondary Structure 
SLPSGVSVRPVFPGARILQGSSQGYVIAIISAMLLAFTAIIIRVLTQYYHLPTFVLAFW
CCCCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAALVALVLLPALLLFKPEWARLRRSQIPFYACYGLLLAVFNSLWTLSVALNGASVATIL
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHH
TYCSVGFTVFLGWMIYSERLNLRQLVVIVVSLGGCFLVSNGDSMGNSHFNLLGLLVGMLS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHH
GIGYTLYTLGGRVATERHYPVWNTILYVFGFSAVYQWLFNIALTLYPLAAFHGMTGSLWF
CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LSEGVQGIEWRGWLLLLTLAAGPTLLGFGLYNISLKTLPLAVANLILSLELVFTAVIAYF
HHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGENMNSLQLLGSALVMGGVLMLKNKTAEA
HHCCCCHHHHHHHHHHHHCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA