Click here to switch to the map view.

The map label for this gene is yfcE [H]

Identifier: 157371556

GI number: 157371556

Start: 3676198

End: 3676749

Strand: Reverse

Name: yfcE [H]

Synonym: Spro_3319

Alternate gene names: 157371556

Gene position: 3676749-3676198 (Counterclockwise)

Preceding gene: 157371560

Following gene: 157371555

Centisome position: 67.48

GC content: 54.35

Gene sequence:

>552_bases
ATGAAGCTGATATTTGCCTCGGATATACATGGTTCGCTTCCCGCCACCGAAAGCCTGTTGGCGCATTTTGAACAAAGCGG
TGCCGACTGGCTGATCCTGTTGGGTGATTTGCTGAATCACGGGCCACGCAATGCACTGCCGGTGGGGTATCAGCCGGCGC
AGGTTGCCGAACAATTGAATCGCTATAGCGACAAGATCATCGCCGTTCGCGGCAACTGCGACAGTGAAGTCGATCAGATG
CTACTGTCCTTCCCTATCACCGCGTCCTGGCAGCAGGTGCTATTACAAAAAAGACGATTGTTTTTAACCCACGGTCACCT
TTATCATCCCTCGGCACTGCCGCCGTTATCTGCCGGAGATGTGCTGGTCTATGGACACAGCCATTTGCCGCAGGCGGAAC
GGCAGGGGGATATTTACTGCTTTAATCCAGGGTCGGTCAGCATTCCGAAGGGGGGCTTTCCTGCCAGCTATGGCATACTG
GAGGACGGCGTTTTAAGTGTGGTCACTTTGCTCGGCGGCAAGGCTGTTGCAGAGGTGGCATTAACGCACTAA

Upstream 100 bases:

>100_bases
ACCACAAGATACATTACAATTTTCCGCAGGCACATCTGTGGGTTGTCGCGCAGCGATGGCGCGCTAAAATAGGGCCTATT
TGCTTATCAGGGACAAGGTT

Downstream 100 bases:

>100_bases
TTTATACACACACAATAAAAATCTTTGAAAAACACTCATTGATTAACCAGTGCGCGGGATGCATCGCGCCAAAATAGAAG
GTTTTAGAGGATGGCGGAAC

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKLIFASDIHGSLPATESLLAHFEQSGADWLILLGDLLNHGPRNALPVGYQPAQVAEQLNRYSDKIIAVRGNCDSEVDQM
LLSFPITASWQQVLLQKRRLFLTHGHLYHPSALPPLSAGDVLVYGHSHLPQAERQGDIYCFNPGSVSIPKGGFPASYGIL
EDGVLSVVTLLGGKAVAEVALTH

Sequences:

>Translated_183_residues
MKLIFASDIHGSLPATESLLAHFEQSGADWLILLGDLLNHGPRNALPVGYQPAQVAEQLNRYSDKIIAVRGNCDSEVDQM
LLSFPITASWQQVLLQKRRLFLTHGHLYHPSALPPLSAGDVLVYGHSHLPQAERQGDIYCFNPGSVSIPKGGFPASYGIL
EDGVLSVVTLLGGKAVAEVALTH
>Mature_183_residues
MKLIFASDIHGSLPATESLLAHFEQSGADWLILLGDLLNHGPRNALPVGYQPAQVAEQLNRYSDKIIAVRGNCDSEVDQM
LLSFPITASWQQVLLQKRRLFLTHGHLYHPSALPPLSAGDVLVYGHSHLPQAERQGDIYCFNPGSVSIPKGGFPASYGIL
EDGVLSVVTLLGGKAVAEVALTH

Specific function: Shows phosphodiesterase activity [H]

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]

Homologues:

Organism=Escherichia coli, GI1788638, Length=182, Percent_Identity=70.3296703296703, Blast_Score=269, Evalue=1e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR020935
- InterPro:   IPR000979 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 19772; Mature: 19772

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS01269 UPF0025

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIFASDIHGSLPATESLLAHFEQSGADWLILLGDLLNHGPRNALPVGYQPAQVAEQLN
CEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHH
RYSDKIIAVRGNCDSEVDQMLLSFPITASWQQVLLQKRRLFLTHGHLYHPSALPPLSAGD
HHCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC
VLVYGHSHLPQAERQGDIYCFNPGSVSIPKGGFPASYGILEDGVLSVVTLLGGKAVAEVA
EEEECCCCCCCCHHCCCEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHE
LTH
ECC
>Mature Secondary Structure
MKLIFASDIHGSLPATESLLAHFEQSGADWLILLGDLLNHGPRNALPVGYQPAQVAEQLN
CEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHH
RYSDKIIAVRGNCDSEVDQMLLSFPITASWQQVLLQKRRLFLTHGHLYHPSALPPLSAGD
HHCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC
VLVYGHSHLPQAERQGDIYCFNPGSVSIPKGGFPASYGILEDGVLSVVTLLGGKAVAEVA
EEEECCCCCCCCHHCCCEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHE
LTH
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]