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The map label for this gene is yfbU [C]

Identifier: 157371551

GI number: 157371551

Start: 3670591

End: 3671088

Strand: Reverse

Name: yfbU [C]

Synonym: Spro_3314

Alternate gene names: 157371551

Gene position: 3671088-3670591 (Counterclockwise)

Preceding gene: 157371552

Following gene: 157371550

Centisome position: 67.37

GC content: 54.42

Gene sequence:

>498_bases
ATGATGGAAATGACCCACGCCCAACGGCTGATCCTGTCGAACCAATACAAGATGATGACCCTGCTGGATCCGGATAACGC
CGAGCGTTATCGCCGCCTTCAGACCATTATCGAACGCGGTTTCGGTTTGCAGATGCGCGAGCTGGACCGCGACTTTGGCG
AAATGAGTGAAGACGTGTGCCGCAGCATTATCAACGTGATGGAAATGCACCATGCGTTGCAGGTTTCCTGGGACAACCTG
AAGGAAAAACAGGGGATTGAGGCACGCCGCCTGGCGTTTCTCGGCTTTGATGCCGCGACTGAAGCGCGTCATCTGAGCTA
CGTGCGTTTCCTGGTGACCACGGAAGGGCGCTATACTCATTTCGATTCCGGCAGCCACGGCTTTAATGCCCAAACCAAAA
TGTGGGAAAAGTACCAGCGGATGCTGGCCATCTGGCTGTCATGCCCACGCCAGTATCATCTGAGCGCCGTAGAGATAGCG
CAAATTATCAATGCCTGA

Upstream 100 bases:

>100_bases
GCCAATAACCCCGGTTTAAATCAAAGAACCGGTGAGTTGTGATTTCCTGCGATATTGCGCTGTGCGATGCTTCCGCCATA
AGTAATTTATCGAGGAAATT

Downstream 100 bases:

>100_bases
TTAAAAGAGGTTTCCTGTGGAGTGTAAGGGTTTTCTGTTCGATCTTGATGGGACGTTGGTTGATTCACTGCCGGCGGTAG
AGCGCGCCTGGATTAACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MMEMTHAQRLILSNQYKMMTLLDPDNAERYRRLQTIIERGFGLQMRELDRDFGEMSEDVCRSIINVMEMHHALQVSWDNL
KEKQGIEARRLAFLGFDAATEARHLSYVRFLVTTEGRYTHFDSGSHGFNAQTKMWEKYQRMLAIWLSCPRQYHLSAVEIA
QIINA

Sequences:

>Translated_165_residues
MMEMTHAQRLILSNQYKMMTLLDPDNAERYRRLQTIIERGFGLQMRELDRDFGEMSEDVCRSIINVMEMHHALQVSWDNL
KEKQGIEARRLAFLGFDAATEARHLSYVRFLVTTEGRYTHFDSGSHGFNAQTKMWEKYQRMLAIWLSCPRQYHLSAVEIA
QIINA
>Mature_165_residues
MMEMTHAQRLILSNQYKMMTLLDPDNAERYRRLQTIIERGFGLQMRELDRDFGEMSEDVCRSIINVMEMHHALQVSWDNL
KEKQGIEARRLAFLGFDAATEARHLSYVRFLVTTEGRYTHFDSGSHGFNAQTKMWEKYQRMLAIWLSCPRQYHLSAVEIA
QIINA

Specific function: Unknown

COG id: COG3013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0304 family [H]

Homologues:

Organism=Escherichia coli, GI87082081, Length=164, Percent_Identity=77.4390243902439, Blast_Score=281, Evalue=1e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005587
- InterPro:   IPR023146
- InterPro:   IPR023145
- ProDom:   PD035118 [H]

Pfam domain/function: PF03887 YfbU [H]

EC number: NA

Molecular weight: Translated: 19449; Mature: 19449

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEMTHAQRLILSNQYKMMTLLDPDNAERYRRLQTIIERGFGLQMRELDRDFGEMSEDVC
CCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RSIINVMEMHHALQVSWDNLKEKQGIEARRLAFLGFDAATEARHLSYVRFLVTTEGRYTH
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCEEE
FDSGSHGFNAQTKMWEKYQRMLAIWLSCPRQYHLSAVEIAQIINA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMEMTHAQRLILSNQYKMMTLLDPDNAERYRRLQTIIERGFGLQMRELDRDFGEMSEDVC
CCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RSIINVMEMHHALQVSWDNLKEKQGIEARRLAFLGFDAATEARHLSYVRFLVTTEGRYTH
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCEEE
FDSGSHGFNAQTKMWEKYQRMLAIWLSCPRQYHLSAVEIAQIINA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA