Definition | Serratia proteamaculans 568 chromosome, complete genome. |
---|---|
Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is menB [H]
Identifier: 157371518
GI number: 157371518
Start: 3624364
End: 3625221
Strand: Reverse
Name: menB [H]
Synonym: Spro_3281
Alternate gene names: 157371518
Gene position: 3625221-3624364 (Counterclockwise)
Preceding gene: 157371519
Following gene: 157371517
Centisome position: 66.53
GC content: 57.58
Gene sequence:
>858_bases ATGCTCTATCCAAATGAAGAACAGCTGTATGCCGCTATCGAATGGCAGGATTGCTCCGGTGATTTCGAAGATATTCTGTA TCACAAGTCCAGCGACGGCATCGCTAAAATCACTATCAACCGTCCACAGGTACGTAATGCCTTCCGCCCGCACACGGTAA AGGAGATGATTGAAGCGCTGTCCAATGCCCGTTACGACGACGGCATTGGCACCATTATCCTCACCGGTGCCGGTGACAAA GCCTTCTGCTCCGGCGGCGATCAGAAAGTCCGCGGCGACTACGGCGGCTATCAGGATGACAGCGGTGTACATCACCTGAA CGTGCTCGACTTCCAGCGCCAGATCCGTACCTGTCCGAAGCCGATAGTGGCGATGGTGGCTGGCTATTCAATCGGTGGCG GCCACGTACTGCACATGATGTGTGACCTGACCATTGCGGCGGACAACGCTATTTTCGGCCAGACCGGCCCGAAAGTGGGC TCTTTCGACGGCGGCTGGGGCGCTTCCTACATGGCGCGCATCGTGGGTCAGAAGAAGGCTCGCGAAATCTGGTTCCTGTG TCGTCAGTATGACGCCGCTGCGGCTTTGGACATGGGCCTGGTCAATACCGTGGTGCCTTTGGCCGATCTGGAGAAAGAAA CCGTGCGCTGGTGCCGCGAAATGCTGCAGAACAGCCCGATGGCGCTGCGCTGTCTGAAAGCGGCCCTGAACGCCGACTGT GACGGTCAGGCCGGTCTGCAGGAGCTGGCGGGTAACGCCACCATGCTGTTCTACATGACTGACGAAGGCCAGGAAGGACG CAACGCGTTTAACGAAAAGCGCCAGCCGGACTTCAGCAAATTCAAGCGTAACCCGTAA
Upstream 100 bases:
>100_bases TCGTGCCGCAGGCCGGGCATAACTCGCACCTGGCCAATCCGCAGGCGTTCGCCGCCGAGCTGCGCAATTTTCTCGTTAAC CCTGGTTAAAGGAACCGAAC
Downstream 100 bases:
>100_bases TGAACACAACCCCCCGTAACGCGGCCCTTTACCGTTACAGCCTGCCAATGGACGCGGGCGTTGTGTTGCGCAATCAGCGG CTAAAAACCCGCGATGGTTT
Product: naphthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MLYPNEEQLYAAIEWQDCSGDFEDILYHKSSDGIAKITINRPQVRNAFRPHTVKEMIEALSNARYDDGIGTIILTGAGDK AFCSGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTCPKPIVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVG SFDGGWGASYMARIVGQKKAREIWFLCRQYDAAAALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADC DGQAGLQELAGNATMLFYMTDEGQEGRNAFNEKRQPDFSKFKRNP
Sequences:
>Translated_285_residues MLYPNEEQLYAAIEWQDCSGDFEDILYHKSSDGIAKITINRPQVRNAFRPHTVKEMIEALSNARYDDGIGTIILTGAGDK AFCSGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTCPKPIVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVG SFDGGWGASYMARIVGQKKAREIWFLCRQYDAAAALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADC DGQAGLQELAGNATMLFYMTDEGQEGRNAFNEKRQPDFSKFKRNP >Mature_285_residues MLYPNEEQLYAAIEWQDCSGDFEDILYHKSSDGIAKITINRPQVRNAFRPHTVKEMIEALSNARYDDGIGTIILTGAGDK AFCSGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTCPKPIVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVG SFDGGWGASYMARIVGQKKAREIWFLCRQYDAAAALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADC DGQAGLQELAGNATMLFYMTDEGQEGRNAFNEKRQPDFSKFKRNP
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=264, Percent_Identity=32.5757575757576, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI31542718, Length=249, Percent_Identity=30.1204819277108, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI45643119, Length=215, Percent_Identity=30.2325581395349, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI260275230, Length=215, Percent_Identity=30.2325581395349, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI260274832, Length=220, Percent_Identity=30.4545454545455, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI4502327, Length=259, Percent_Identity=28.1853281853282, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI213417737, Length=221, Percent_Identity=25.3393665158371, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI25453481, Length=254, Percent_Identity=24.8031496062992, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI51538573, Length=254, Percent_Identity=24.8031496062992, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI157694516, Length=221, Percent_Identity=25.3393665158371, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI4757966, Length=254, Percent_Identity=24.8031496062992, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI51538581, Length=254, Percent_Identity=24.8031496062992, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI37594469, Length=156, Percent_Identity=28.8461538461538, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI4757968, Length=254, Percent_Identity=25.1968503937008, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI49355787, Length=254, Percent_Identity=25.1968503937008, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI37594471, Length=156, Percent_Identity=28.8461538461538, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI70995211, Length=238, Percent_Identity=27.3109243697479, Blast_Score=68, Evalue=8e-12, Organism=Escherichia coli, GI1788597, Length=285, Percent_Identity=91.5789473684211, Blast_Score=553, Evalue=1e-159, Organism=Escherichia coli, GI1787659, Length=247, Percent_Identity=30.3643724696356, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI221142681, Length=255, Percent_Identity=29.4117647058824, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI87082183, Length=255, Percent_Identity=27.4509803921569, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1787660, Length=268, Percent_Identity=29.4776119402985, Blast_Score=81, Evalue=8e-17, Organism=Caenorhabditis elegans, GI25145438, Length=255, Percent_Identity=30.9803921568627, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17554946, Length=248, Percent_Identity=30.241935483871, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17540714, Length=206, Percent_Identity=29.6116504854369, Blast_Score=103, Evalue=8e-23, Organism=Caenorhabditis elegans, GI17535521, Length=210, Percent_Identity=26.1904761904762, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17549921, Length=197, Percent_Identity=25.3807106598985, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17534483, Length=264, Percent_Identity=27.6515151515151, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17536985, Length=215, Percent_Identity=27.4418604651163, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI20129971, Length=250, Percent_Identity=34, Blast_Score=114, Evalue=5e-26, Organism=Drosophila melanogaster, GI24653477, Length=250, Percent_Identity=34, Blast_Score=114, Evalue=5e-26, Organism=Drosophila melanogaster, GI24653139, Length=270, Percent_Identity=27.4074074074074, Blast_Score=107, Evalue=8e-24, Organism=Drosophila melanogaster, GI21357171, Length=189, Percent_Identity=31.2169312169312, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24650670, Length=187, Percent_Identity=31.5508021390374, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 31475; Mature: 31475
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYPNEEQLYAAIEWQDCSGDFEDILYHKSSDGIAKITINRPQVRNAFRPHTVKEMIEAL CCCCCCCCEEEEEEECCCCCCHHHHHEECCCCCEEEEEECCHHHHCCCCCHHHHHHHHHH SNARYDDGIGTIILTGAGDKAFCSGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTCPK HCCCCCCCCCEEEEECCCCCCEECCCCCEECCCCCCCCCCCCCEEEHHHHHHHHHHCCCH PIVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKA HHHHHHHCCCCCCHHHHHHHHHEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHH REIWFLCRQYDAAAALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCC DGQAGLQELAGNATMLFYMTDEGQEGRNAFNEKRQPDFSKFKRNP CCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCHHHHCCCC >Mature Secondary Structure MLYPNEEQLYAAIEWQDCSGDFEDILYHKSSDGIAKITINRPQVRNAFRPHTVKEMIEAL CCCCCCCCEEEEEEECCCCCCHHHHHEECCCCCEEEEEECCHHHHCCCCCHHHHHHHHHH SNARYDDGIGTIILTGAGDKAFCSGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTCPK HCCCCCCCCCEEEEECCCCCCEECCCCCEECCCCCCCCCCCCCEEEHHHHHHHHHHCCCH PIVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKA HHHHHHHCCCCCCHHHHHHHHHEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHH REIWFLCRQYDAAAALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCC DGQAGLQELAGNATMLFYMTDEGQEGRNAFNEKRQPDFSKFKRNP CCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]