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The map label for this gene is ndpA [C]

Identifier: 157371492

GI number: 157371492

Start: 3590529

End: 3591539

Strand: Reverse

Name: ndpA [C]

Synonym: Spro_3255

Alternate gene names: 157371492

Gene position: 3591539-3590529 (Counterclockwise)

Preceding gene: 157371495

Following gene: 157371489

Centisome position: 65.91

GC content: 56.18

Gene sequence:

>1011_bases
ATGAGTCTGGATATCGACCAGATCGCTCTGCACCAGTTGGTCAAACGCGACGAACAAACGCTGGATGTGGTGCTGCGCGA
TTCTCTGCTGCCCACCAATGCGGCGGTGGAAGAGATGATGGAAGAGCTGCATCGTGTCTACAGTGCCAAGAGCAAGGCTT
ACGGCCTGTTCAATGAAGGCAGTGAGCTGGCGGACGCGCTGCGTACCTGCCGCAAGGAAGATAAGGACTTTCTGGCCTTC
AGCCGTGCGGCGACTGGTCGCCTGCGCGATGAGCTGGCCAAGTATCCCTTTGCCGAAGGCGGCGTGGTGCTGTTTGGTCA
GTACCGCTACCTGGCGGTGGAGTATTTGCTGATTGCGGTGCTGAACAGCCGTAACAGTTCGCGCGTTAACGAAGAGCTGG
ATATCAATACCACTCATTATCTGGATATCAACCACGCCGATATCGTGGCACGCATCGATCTGACCGAGTGGGAAACCAAT
CCGGAGTCGACCCGTTACCTGACTTTCCTGAAAGGGCGGGTGGGCCGCAAGGTGTCCGATTTCTTTATGGATTTCCTGGC
GGCGGCCGAAGGTCTGGATACCAAGGCGCAAAACCGGGGCTTGCTGCAGGCGGTTGACGATTACTGCGCCGATGCCCAAC
TGGACAAGAATGAGCGCCAGTCGGTACGTCAGCAGGTTTACAGCTATTGCAACGAACAGCTGCAGGCCGGTGAAGAAATT
GAACTGCAGGAACTGTCGAAAGAGATTGCGCCCGTAGGCGAGAAAGATTTTCTGCAGTTTTCCAGCGAGCAGGGTTATCA
ACTGGAAGACAGTTTCCCGGCCGATCGTGGCACGCTGCGTCAGTTGACCAAGTTTGCCGGCAGCGGCGGTGGCATCAGCA
TGAACTTTGATGCCATGCTGTTGGGGGAGCGAATTTTCTGGGATGCGGCTACCGATACGCTAACCATCAGAGGGACGCCA
CCGAACCTGCGTGACCAGTTACAACGTCGCCAGAACAGCGGCAACAAGTAA

Upstream 100 bases:

>100_bases
GGAAATTTATTGATGTCTGGTGATGAGATCACTGCTTTAAAGTTGCAGCACGGTAGCCTTCAGTGTTTGAATACGCGCCT
AAAGAACAGGAGGATTTACC

Downstream 100 bases:

>100_bases
TTTCACCAGATCGCAGACAATAAAAAACGCCGCAATTGCGGCGTTTTCTACTTCGGCGTCCCGAAAGGTTCGATTTCGTT
GCGATTAAACGCGACGGAAG

Product: nucleoid-associated protein NdpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MSLDIDQIALHQLVKRDEQTLDVVLRDSLLPTNAAVEEMMEELHRVYSAKSKAYGLFNEGSELADALRTCRKEDKDFLAF
SRAATGRLRDELAKYPFAEGGVVLFGQYRYLAVEYLLIAVLNSRNSSRVNEELDINTTHYLDINHADIVARIDLTEWETN
PESTRYLTFLKGRVGRKVSDFFMDFLAAAEGLDTKAQNRGLLQAVDDYCADAQLDKNERQSVRQQVYSYCNEQLQAGEEI
ELQELSKEIAPVGEKDFLQFSSEQGYQLEDSFPADRGTLRQLTKFAGSGGGISMNFDAMLLGERIFWDAATDTLTIRGTP
PNLRDQLQRRQNSGNK

Sequences:

>Translated_336_residues
MSLDIDQIALHQLVKRDEQTLDVVLRDSLLPTNAAVEEMMEELHRVYSAKSKAYGLFNEGSELADALRTCRKEDKDFLAF
SRAATGRLRDELAKYPFAEGGVVLFGQYRYLAVEYLLIAVLNSRNSSRVNEELDINTTHYLDINHADIVARIDLTEWETN
PESTRYLTFLKGRVGRKVSDFFMDFLAAAEGLDTKAQNRGLLQAVDDYCADAQLDKNERQSVRQQVYSYCNEQLQAGEEI
ELQELSKEIAPVGEKDFLQFSSEQGYQLEDSFPADRGTLRQLTKFAGSGGGISMNFDAMLLGERIFWDAATDTLTIRGTP
PNLRDQLQRRQNSGNK
>Mature_335_residues
SLDIDQIALHQLVKRDEQTLDVVLRDSLLPTNAAVEEMMEELHRVYSAKSKAYGLFNEGSELADALRTCRKEDKDFLAFS
RAATGRLRDELAKYPFAEGGVVLFGQYRYLAVEYLLIAVLNSRNSSRVNEELDINTTHYLDINHADIVARIDLTEWETNP
ESTRYLTFLKGRVGRKVSDFFMDFLAAAEGLDTKAQNRGLLQAVDDYCADAQLDKNERQSVRQQVYSYCNEQLQAGEEIE
LQELSKEIAPVGEKDFLQFSSEQGYQLEDSFPADRGTLRQLTKFAGSGGGISMNFDAMLLGERIFWDAATDTLTIRGTPP
NLRDQLQRRQNSGNK

Specific function: Unknown

COG id: COG3081

COG function: function code R; Nucleoid-associated protein

Gene ontology:

Cell location: Cytoplasm, nucleoid

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YejK family

Homologues:

Organism=Escherichia coli, GI1788513, Length=335, Percent_Identity=79.4029850746269, Blast_Score=553, Evalue=1e-159,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NDPA_SERP5 (A8GGW3)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001479481.1
- STRING:   A8GGW3
- GeneID:   5606752
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_3255
- eggNOG:   COG3081
- HOGENOM:   HBG296787
- OMA:   TDYLFIA
- ProtClustDB:   PRK00378
- BioCyc:   SPRO399741:SPRO_3255-MONOMER
- GO:   GO:0005737
- GO:   GO:0009295
- HAMAP:   MF_00730
- InterPro:   IPR007358

Pfam domain/function: PF04245 NA37

EC number: NA

Molecular weight: Translated: 38051; Mature: 37920

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDIDQIALHQLVKRDEQTLDVVLRDSLLPTNAAVEEMMEELHRVYSAKSKAYGLFNEG
CCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SELADALRTCRKEDKDFLAFSRAATGRLRDELAKYPFAEGGVVLFGQYRYLAVEYLLIAV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHH
LNSRNSSRVNEELDINTTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVSD
HHCCCCHHCCCCCCCCCEEEEECCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHCCHHHH
FFMDFLAAAEGLDTKAQNRGLLQAVDDYCADAQLDKNERQSVRQQVYSYCNEQLQAGEEI
HHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
ELQELSKEIAPVGEKDFLQFSSEQGYQLEDSFPADRGTLRQLTKFAGSGGGISMNFDAML
HHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCHHHH
LGERIFWDAATDTLTIRGTPPNLRDQLQRRQNSGNK
HCCHHEEECCCCEEEEECCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLDIDQIALHQLVKRDEQTLDVVLRDSLLPTNAAVEEMMEELHRVYSAKSKAYGLFNEG
CCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SELADALRTCRKEDKDFLAFSRAATGRLRDELAKYPFAEGGVVLFGQYRYLAVEYLLIAV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHH
LNSRNSSRVNEELDINTTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVSD
HHCCCCHHCCCCCCCCCEEEEECCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHCCHHHH
FFMDFLAAAEGLDTKAQNRGLLQAVDDYCADAQLDKNERQSVRQQVYSYCNEQLQAGEEI
HHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
ELQELSKEIAPVGEKDFLQFSSEQGYQLEDSFPADRGTLRQLTKFAGSGGGISMNFDAML
HHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCHHHH
LGERIFWDAATDTLTIRGTPPNLRDQLQRRQNSGNK
HCCHHEEECCCCEEEEECCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA