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The map label for this gene is yfiH [H]

Identifier: 157371432

GI number: 157371432

Start: 3518840

End: 3519781

Strand: Reverse

Name: yfiH [H]

Synonym: Spro_3195

Alternate gene names: 157371432

Gene position: 3519781-3518840 (Counterclockwise)

Preceding gene: 157371433

Following gene: 157371431

Centisome position: 64.6

GC content: 59.87

Gene sequence:

>942_bases
ATGAAGCTTTCTTTCTGTACCGATAGTCTGGGCCACCTGCCGTTTGAAGCCATGTTGGATCGATTGGGCGAATTGGGGGT
GTTTGGAGTGGAAATGACCACCGGCGGCTGGTCTTCGGCACCGCATCTGGATACCGTGGCGTTATTGCAGGACGCCGGTA
AGCGCCGACGGTTACTGGCGGCACTGGAAAGCCGCGGCATGAAGATTGCCGCGCTGAACGTTTCCGGCAATCCGCTGGAG
CCGGGCGTGCTGGGTGAAAAGCATCGCCACGATACCGACAACACGCTGGCGCTGGCCGCCGGCCTGGGGGTGAAGAAAAT
CGTCATGATGAGCGGATTGCCCCCTGCGGCGCCCGGCGACAGTATCCCCAACTGGATCACCTATACCGTCAGTTGGCCGC
CGACGCTGAAAAACTGCCTGGATTATCAGTGGAACGAAGTGGCAATCCCCTACTGGCAACGGCTGGTGGAAAAGGCACAG
GCGTTTGGCATCGAGAAATTCGCGCTGGAGAACTTTAGCTCGATGCTGGTGTGGAACCCCGACACCTTGTTCAGGCTGCG
TGACGCGGTGGGGCCGATGGTCGGGCTGAATCTTGATCCCAGCCACCTGATTTGGATGGGGGCCGATCCGATTGCCGTAG
CCCGCCGTTTGGGGGACGCCATCCACCACGTGCACGGCAAGGACGTAAGGCTGGAAAGGGGCGTGGTGGCAGTCAACGGG
CTGCTGGAAACCCGGCCGGTGGAGCAGGTGGCGGAGCGCGCCTGGAATTATGTGGCGGTCGGCTGCGGGCAGGATCTGCA
GTGGTGGAAAGAGTTTTTCTCGGTGGTACGCATGATGGGCTATAACGACTGGGTGTCGCTGGAGATGGAGGATCTGACCA
TGTCGGTCGATGCCGGCATCAATACCTCGGTCGAGGCGTTAAAGCACTGTATCAGTCAGTAA

Upstream 100 bases:

>100_bases
CGGGATCGACGGTGTGCGCTGGATTGAAAACTGCGTGCGCTCAGCCGATCAGGGTGCTTGCTGGGTAGCCTTTGAATAAA
CCTTTTTGCGGAGACATAAC

Downstream 100 bases:

>100_bases
ACGGCATCCGTTGCTGTCCAGGGTCTGCCGTTGTGCAGGCCGTGGATGGCAAAAGGCTGGCGAAAAAAACAGGTTAATAA
AAATGTGACGCATGTCGCAT

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKLSFCTDSLGHLPFEAMLDRLGELGVFGVEMTTGGWSSAPHLDTVALLQDAGKRRRLLAALESRGMKIAALNVSGNPLE
PGVLGEKHRHDTDNTLALAAGLGVKKIVMMSGLPPAAPGDSIPNWITYTVSWPPTLKNCLDYQWNEVAIPYWQRLVEKAQ
AFGIEKFALENFSSMLVWNPDTLFRLRDAVGPMVGLNLDPSHLIWMGADPIAVARRLGDAIHHVHGKDVRLERGVVAVNG
LLETRPVEQVAERAWNYVAVGCGQDLQWWKEFFSVVRMMGYNDWVSLEMEDLTMSVDAGINTSVEALKHCISQ

Sequences:

>Translated_313_residues
MKLSFCTDSLGHLPFEAMLDRLGELGVFGVEMTTGGWSSAPHLDTVALLQDAGKRRRLLAALESRGMKIAALNVSGNPLE
PGVLGEKHRHDTDNTLALAAGLGVKKIVMMSGLPPAAPGDSIPNWITYTVSWPPTLKNCLDYQWNEVAIPYWQRLVEKAQ
AFGIEKFALENFSSMLVWNPDTLFRLRDAVGPMVGLNLDPSHLIWMGADPIAVARRLGDAIHHVHGKDVRLERGVVAVNG
LLETRPVEQVAERAWNYVAVGCGQDLQWWKEFFSVVRMMGYNDWVSLEMEDLTMSVDAGINTSVEALKHCISQ
>Mature_313_residues
MKLSFCTDSLGHLPFEAMLDRLGELGVFGVEMTTGGWSSAPHLDTVALLQDAGKRRRLLAALESRGMKIAALNVSGNPLE
PGVLGEKHRHDTDNTLALAAGLGVKKIVMMSGLPPAAPGDSIPNWITYTVSWPPTLKNCLDYQWNEVAIPYWQRLVEKAQ
AFGIEKFALENFSSMLVWNPDTLFRLRDAVGPMVGLNLDPSHLIWMGADPIAVARRLGDAIHHVHGKDVRLERGVVAVNG
LLETRPVEQVAERAWNYVAVGCGQDLQWWKEFFSVVRMMGYNDWVSLEMEDLTMSVDAGINTSVEALKHCISQ

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011418
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2; PF07582 AP_endonuc_2_N [H]

EC number: NA

Molecular weight: Translated: 34587; Mature: 34587

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSFCTDSLGHLPFEAMLDRLGELGVFGVEMTTGGWSSAPHLDTVALLQDAGKRRRLLA
CCCCCCCCHHCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHH
ALESRGMKIAALNVSGNPLEPGVLGEKHRHDTDNTLALAAGLGVKKIVMMSGLPPAAPGD
HHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCC
SIPNWITYTVSWPPTLKNCLDYQWNEVAIPYWQRLVEKAQAFGIEKFALENFSSMLVWNP
CCCCCEEEEEECCHHHHHHHCCCCCCEECHHHHHHHHHHHHCCHHHHHHHCCCCEEEECC
DTLFRLRDAVGPMVGLNLDPSHLIWMGADPIAVARRLGDAIHHVHGKDVRLERGVVAVNG
HHHHHHHHHCCCEEECCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCEEEECC
LLETRPVEQVAERAWNYVAVGCGQDLQWWKEFFSVVRMMGYNDWVSLEMEDLTMSVDAGI
CCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEHHEEEEECCCC
NTSVEALKHCISQ
CHHHHHHHHHHCC
>Mature Secondary Structure
MKLSFCTDSLGHLPFEAMLDRLGELGVFGVEMTTGGWSSAPHLDTVALLQDAGKRRRLLA
CCCCCCCCHHCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHH
ALESRGMKIAALNVSGNPLEPGVLGEKHRHDTDNTLALAAGLGVKKIVMMSGLPPAAPGD
HHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCC
SIPNWITYTVSWPPTLKNCLDYQWNEVAIPYWQRLVEKAQAFGIEKFALENFSSMLVWNP
CCCCCEEEEEECCHHHHHHHCCCCCCEECHHHHHHHHHHHHCCHHHHHHHCCCCEEEECC
DTLFRLRDAVGPMVGLNLDPSHLIWMGADPIAVARRLGDAIHHVHGKDVRLERGVVAVNG
HHHHHHHHHCCCEEECCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCEEEECC
LLETRPVEQVAERAWNYVAVGCGQDLQWWKEFFSVVRMMGYNDWVSLEMEDLTMSVDAGI
CCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEHHEEEEECCCC
NTSVEALKHCISQ
CHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377; 8704981 [H]