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The map label for this gene is citD

Identifier: 157371409

GI number: 157371409

Start: 3488719

End: 3489027

Strand: Reverse

Name: citD

Synonym: Spro_3170

Alternate gene names: 157371409

Gene position: 3489027-3488719 (Counterclockwise)

Preceding gene: 157371410

Following gene: 157371408

Centisome position: 64.03

GC content: 60.84

Gene sequence:

>309_bases
ATGAAAATTATCCGAGAAGCAATGGCCGGCACGCTGGAATCCAGCGATGTCATGGTGCGCATCGCCCCCGCCGAGGGGCC
GGAACACGACCTGCTGATCGCCAGCAGCGTGGAAAAACAGTTTGGCGAAGCCATCCGCCAGACGCTGTTGCAGGTGCTGC
AGCACTACCAGGTGGAGCCGGTGCAGGTGATGGTGGACGACAAAGGGGCGCTCGACTGCGTACTGCGGGCCCGACTGGAA
ACCGCGCTGATGCGTGCCTGCGACAATGGCCAACTGCCTTGGGGAGCGCCTAATGAAAACGCTGAATAA

Upstream 100 bases:

>100_bases
TGGTGCCACCGGACACCCTGTATTACCTGCAAGATTTGCAAACGCAGCGCCGGGCCAAACCGGCGGCCACCCCCTTTGAA
TCCGCACAATCAGGTGAAAG

Downstream 100 bases:

>100_bases
ACACCGCCTGCGTCGCAGCATGCTGTTCGTGCCCAGTGCCAACGCGGCGATGGTAAGCAACGCTTTTATCTATCAGGCCG
ATGCGCTGATGTTCGATCTG

Product: citrate lyase subunit gamma

Products: acetate; oxaloacetate

Alternate protein names: Citrate lyase gamma chain

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MKIIREAMAGTLESSDVMVRIAPAEGPEHDLLIASSVEKQFGEAIRQTLLQVLQHYQVEPVQVMVDDKGALDCVLRARLE
TALMRACDNGQLPWGAPNENAE

Sequences:

>Translated_102_residues
MKIIREAMAGTLESSDVMVRIAPAEGPEHDLLIASSVEKQFGEAIRQTLLQVLQHYQVEPVQVMVDDKGALDCVLRARLE
TALMRACDNGQLPWGAPNENAE
>Mature_102_residues
MKIIREAMAGTLESSDVMVRIAPAEGPEHDLLIASSVEKQFGEAIRQTLLQVLQHYQVEPVQVMVDDKGALDCVLRARLE
TALMRACDNGQLPWGAPNENAE

Specific function: Covalent carrier of the coenzyme of citrate lyase

COG id: COG3052

COG function: function code C; Citrate lyase, gamma subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitD family

Homologues:

Organism=Escherichia coli, GI1786834, Length=94, Percent_Identity=63.8297872340426, Blast_Score=115, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CITD_SERP5 (A8GGN0)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001479398.1
- STRING:   A8GGN0
- GeneID:   5605422
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_3170
- eggNOG:   COG3052
- HOGENOM:   HBG359308
- OMA:   ESSDIMI
- ProtClustDB:   PRK13253
- BioCyc:   SPRO399741:SPRO_3170-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00805
- InterPro:   IPR006495
- InterPro:   IPR009662
- PIRSF:   PIRSF002736
- ProDom:   PD015389
- TIGRFAMs:   TIGR01608

Pfam domain/function: PF06857 MdcD

EC number: 4.1.3.6

Molecular weight: Translated: 11229; Mature: 11229

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIREAMAGTLESSDVMVRIAPAEGPEHDLLIASSVEKQFGEAIRQTLLQVLQHYQVEP
CHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VQVMVDDKGALDCVLRARLETALMRACDNGQLPWGAPNENAE
EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKIIREAMAGTLESSDVMVRIAPAEGPEHDLLIASSVEKQFGEAIRQTLLQVLQHYQVEP
CHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VQVMVDDKGALDCVLRARLETALMRACDNGQLPWGAPNENAE
EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: citrate

Specific reaction: citrate = acetate + oxaloacetate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA