| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is minD [H]
Identifier: 157370997
GI number: 157370997
Start: 3036748
End: 3037560
Strand: Direct
Name: minD [H]
Synonym: Spro_2757
Alternate gene names: 157370997
Gene position: 3036748-3037560 (Clockwise)
Preceding gene: 157370996
Following gene: 157370998
Centisome position: 55.73
GC content: 54.24
Gene sequence:
>813_bases ATGGCACGCATTATTGTTGTTACATCGGGTAAAGGGGGCGTTGGCAAGACCACTTCAAGCGCGGCCATCGCTACCGGCCT AGCCCAAAAAGGTAAGAAAACCGTGGTGATCGATTTTGATATCGGTCTGCGGAATCTTGACCTGATCATGGGCTGCGAAC GCCGGGTGGTTTACGATTTCGTTAACGTCATTCAGGGTGATGCCACGCTGAACCAGGCGTTGATCAAAGACAAGCGCACC GATAACCTGTTTATCTTGCCGGCTTCGCAAACGCGCGATAAAGACGCGCTGACCCGCGAAGGCGTTGAAAAGATCCTCAA CGATTTGGGCGAGATGAATTTTGACTTCGTGGTCTGTGACTCTCCGGCAGGTATCGAAACCGGCGCGCTGATGGCGCTGT ACTTCGCAGATGAAGCCATCATCACCACCAACCCGGAAGTTTCCTCAGTACGTGACTCCGACCGTATTCTGGGCATTTTA TCATCCAAATCCCGTCGCGCTGAAAGAGGCGAATCGGCGATTAAGGAACATCTGCTGCTGACTCGCTATAACCCGGGCCG CGTGAGCCGTGGCGATATGCTGAGCATGGAAGACGTACTGGAAATCCTGCGCATTCCACTGGTCGGCGTTATCCCGGAAG ACCAGTCCGTGCTGCGGGCCTCCAACCAGGGTGAGCCGGTGATCCTTGATGCCGAATCAGACGCTGGCAAGGCCTATGAC GACACCGTTAGCCGCTTGTTAGGGGAAGAACGCCCCTTCCGCTTCATTGAAGAAGAGAAGAAGGGTTTCCTGAAACGCCT TTTTGGGGGATAA
Upstream 100 bases:
>100_bases CCGTCCGACTTTGTCGGGCAGGCTGTACGACTCAGCCTGTTGGATAACGCTTTAACCATACAACCTTTAAATTAAGCCCT TTTGACAAGGAATCCATTTC
Downstream 100 bases:
>100_bases ACCATGGCATTACTAGACTTCTTTCTGTCCCGCAAAAAGCAGACAGCCAATATAGCCAAGGAACGGCTGCAGATTATCGT CGCGGAGCGTCGTCGGGGGG
Product: cell division inhibitor MinD
Products: NA
Alternate protein names: Cell division inhibitor minD [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRT DNLFILPASQTRDKDALTREGVEKILNDLGEMNFDFVVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGIL SSKSRRAERGESAIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIPLVGVIPEDQSVLRASNQGEPVILDAESDAGKAYD DTVSRLLGEERPFRFIEEEKKGFLKRLFGG
Sequences:
>Translated_270_residues MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRT DNLFILPASQTRDKDALTREGVEKILNDLGEMNFDFVVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGIL SSKSRRAERGESAIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIPLVGVIPEDQSVLRASNQGEPVILDAESDAGKAYD DTVSRLLGEERPFRFIEEEKKGFLKRLFGG >Mature_269_residues ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTD NLFILPASQTRDKDALTREGVEKILNDLGEMNFDFVVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILS SKSRRAERGESAIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIPLVGVIPEDQSVLRASNQGEPVILDAESDAGKAYDD TVSRLLGEERPFRFIEEEKKGFLKRLFGG
Specific function: ATPase required for the correct placement of the division site. Cell division inhibitors minC and minD act in concert to form an inhibitor capable of blocking formation of the polar Z ring septums. Rapidly oscillates between the poles of the cell to desta
COG id: COG2894
COG function: function code D; Septum formation inhibitor-activating ATPase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family. MinD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787423, Length=270, Percent_Identity=92.5925925925926, Blast_Score=503, Evalue=1e-144,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR010223 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 29563; Mature: 29432
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDF CEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHCCCHHHHHHH VNVIQGDATLNQALIKDKRTDNLFILPASQTRDKDALTREGVEKILNDLGEMNFDFVVCD HHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEC SPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILSSKSRRAERGESAIKEHLLL CCCCCCCCCEEEEEECCCEEEECCCCHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHEE TRYNPGRVSRGDMLSMEDVLEILRIPLVGVIPEDQSVLRASNQGEPVILDAESDAGKAYD EECCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCHHHHHHCCCCCEEEEECCCCCCCHHH DTVSRLLGEERPFRFIEEEKKGFLKRLFGG HHHHHHHCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDF EEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHCCCHHHHHHH VNVIQGDATLNQALIKDKRTDNLFILPASQTRDKDALTREGVEKILNDLGEMNFDFVVCD HHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEC SPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILSSKSRRAERGESAIKEHLLL CCCCCCCCCEEEEEECCCEEEECCCCHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHEE TRYNPGRVSRGDMLSMEDVLEILRIPLVGVIPEDQSVLRASNQGEPVILDAESDAGKAYD EECCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCHHHHHHCCCCCEEEEECCCCCCCHHH DTVSRLLGEERPFRFIEEEKKGFLKRLFGG HHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]