| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157369707
Identifier: 157369707
GI number: 157369707
Start: 1596024
End: 1596929
Strand: Reverse
Name: 157369707
Synonym: Spro_1464
Alternate gene names: NA
Gene position: 1596929-1596024 (Counterclockwise)
Preceding gene: 157369712
Following gene: 157369705
Centisome position: 29.31
GC content: 60.38
Gene sequence:
>906_bases ATGGAACATGTATTAAACTGTTACTATATAGCCAGTTATACTATTACTAACAGCAACAGGACAGCCACTATGCCGCCGCG TACCCTCAACCGCACCCGCCAGGATCTGGCGGATTTTCTGCGTCAAAAGCGTGAGAAATTATCGCCGCAGGCGGTAGGTC TGCCGAGTGGTACCCGGCGCAGAACTCCGGGGCTGCGACGGGAAGAAGTGGCCGCTCTGGCGGGCGTGGGCCTCACCTGG TATACCTGGCTGGAACAGGGGCGGGAAATCAACGCCTCGGTGGATTTTCTGGAGAATCTGGCACGGGTGCTGAAGCTGGA CGCGACCGGGCGCTACCATCTGTTTTTGCTGGCGCATCAGCGCCCGCCGGTACCGGTCGGTCATCAGTGGTGTCAGGTTT CGCCGCTGGTGCGCCGCCTGCTGGACGACCTGCAACTGCGGCCGGCTTACGTCATGAACCTGAGCTGGGACATCATCGCC TGGAACCCGGCGGCGGATTTGCTGTTCGCCATCGGCGATCGCCCGGCGGAGCAGCGCAATATGCTGTGGATGCTGTTCGC CGATCCGCAACTCAACCAGCGCCTGGTGGAATGGCAGGCACAGGCGCCTCAGGTTCTGGCCAGCTTTCGCCGCGACTACG CCCGCGCGCCGGAAGACGCCGTCATGCAGCAACGGGTGCAGGCATTGGAGCAGGTATCGCCGCAGTTCCGCCAACTGTGG CAGCAGCATGATATTCACGGTCGTTGCCAGGGGCAGCGTACTTTCAAGGTGCCGGAGGTCGGCCAGGTGACTTTTGAACA TGCTTCTTTCATTGTCGATGAGGAAAATCATTTACGACTGGTGATGTACAGCGCGCTGGCGCAATGCCCGGCCAGCGCGG CGTTTGAGGCGTTATTGCAGGGGTAA
Upstream 100 bases:
>100_bases AAAACCGCCCAGCAACAACACCGGCAACCCCGACAGACGACGCTCGTCTCCCGCTAATGACTGTTCCATAATGACCTCCA GAGATTGGGATGGCGGCAGT
Downstream 100 bases:
>100_bases GGCTATTTACGACTGTCAAAAATCAGCTTGCAGGCCAGCCCGGCAAATCACTGTTCAGGTGCCTGCTTGCCGCCTGGCGC AGCCGTTAGCCGCATGCGGC
Product: helix-turn-helix domain-containing protein
Products: NA
Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator XRE Family; Helix-Turn-Helix Protein; Transcriptional Regulator Protein; XRE Family Transcription Regulator Protein
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MEHVLNCYYIASYTITNSNRTATMPPRTLNRTRQDLADFLRQKREKLSPQAVGLPSGTRRRTPGLRREEVAALAGVGLTW YTWLEQGREINASVDFLENLARVLKLDATGRYHLFLLAHQRPPVPVGHQWCQVSPLVRRLLDDLQLRPAYVMNLSWDIIA WNPAADLLFAIGDRPAEQRNMLWMLFADPQLNQRLVEWQAQAPQVLASFRRDYARAPEDAVMQQRVQALEQVSPQFRQLW QQHDIHGRCQGQRTFKVPEVGQVTFEHASFIVDEENHLRLVMYSALAQCPASAAFEALLQG
Sequences:
>Translated_301_residues MEHVLNCYYIASYTITNSNRTATMPPRTLNRTRQDLADFLRQKREKLSPQAVGLPSGTRRRTPGLRREEVAALAGVGLTW YTWLEQGREINASVDFLENLARVLKLDATGRYHLFLLAHQRPPVPVGHQWCQVSPLVRRLLDDLQLRPAYVMNLSWDIIA WNPAADLLFAIGDRPAEQRNMLWMLFADPQLNQRLVEWQAQAPQVLASFRRDYARAPEDAVMQQRVQALEQVSPQFRQLW QQHDIHGRCQGQRTFKVPEVGQVTFEHASFIVDEENHLRLVMYSALAQCPASAAFEALLQG >Mature_301_residues MEHVLNCYYIASYTITNSNRTATMPPRTLNRTRQDLADFLRQKREKLSPQAVGLPSGTRRRTPGLRREEVAALAGVGLTW YTWLEQGREINASVDFLENLARVLKLDATGRYHLFLLAHQRPPVPVGHQWCQVSPLVRRLLDDLQLRPAYVMNLSWDIIA WNPAADLLFAIGDRPAEQRNMLWMLFADPQLNQRLVEWQAQAPQVLASFRRDYARAPEDAVMQQRVQALEQVSPQFRQLW QQHDIHGRCQGQRTFKVPEVGQVTFEHASFIVDEENHLRLVMYSALAQCPASAAFEALLQG
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34592; Mature: 34592
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHVLNCYYIASYTITNSNRTATMPPRTLNRTRQDLADFLRQKREKLSPQAVGLPSGTRR CCCCEEEEEEEEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCC RTPGLRREEVAALAGVGLTWYTWLEQGREINASVDFLENLARVLKLDATGRYHLFLLAHQ CCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECC RPPVPVGHQWCQVSPLVRRLLDDLQLRPAYVMNLSWDIIAWNPAADLLFAIGDRPAEQRN CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECHHHHHHHHHCCCCCCCCC MLWMLFADPQLNQRLVEWQAQAPQVLASFRRDYARAPEDAVMQQRVQALEQVSPQFRQLW EEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHH QQHDIHGRCQGQRTFKVPEVGQVTFEHASFIVDEENHLRLVMYSALAQCPASAAFEALLQ HHCCCCCEECCCEEECCCCCCCEEEHHHEEEECCCCCEEHHHHHHHHHCCHHHHHHHHHC G C >Mature Secondary Structure MEHVLNCYYIASYTITNSNRTATMPPRTLNRTRQDLADFLRQKREKLSPQAVGLPSGTRR CCCCEEEEEEEEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCC RTPGLRREEVAALAGVGLTWYTWLEQGREINASVDFLENLARVLKLDATGRYHLFLLAHQ CCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECC RPPVPVGHQWCQVSPLVRRLLDDLQLRPAYVMNLSWDIIAWNPAADLLFAIGDRPAEQRN CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECHHHHHHHHHCCCCCCCCC MLWMLFADPQLNQRLVEWQAQAPQVLASFRRDYARAPEDAVMQQRVQALEQVSPQFRQLW EEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHH QQHDIHGRCQGQRTFKVPEVGQVTFEHASFIVDEENHLRLVMYSALAQCPASAAFEALLQ HHCCCCCEECCCEEECCCCCCCEEEHHHEEEECCCCCEEHHHHHHHHHCCHHHHHHHHHC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA