| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ywtG [H]
Identifier: 157369686
GI number: 157369686
Start: 1575528
End: 1577009
Strand: Reverse
Name: ywtG [H]
Synonym: Spro_1443
Alternate gene names: 157369686
Gene position: 1577009-1575528 (Counterclockwise)
Preceding gene: 157369693
Following gene: 157369683
Centisome position: 28.94
GC content: 59.18
Gene sequence:
>1482_bases ATGTCCAGTTATATTGCGGCCTCTGACGCCGCTAATTCGGCAGGGAATACTGATTTACCGACCGGTGAAGTCGTCACCCT GCGCAGCGCTGCCGACGTCTCCACGCTGGTCAATGGCGGTGCAGCCAAAAGCAACAATGCCCGCATTGTCGTAGCGATTG CACTCGGCGGCGTCTTTCTCGACGCCTACGATCTGGGTGCACTGGCTTTCGGCATCAAAGATGTGGCGCGCGAATTCAAT CTGTCGCCAACCGGCACCGGATTGATCGCTTCTGCCATTACTTTCGGCGCGATTATCGGTGCATTTATTGGCGGCTACCT GACCGATAAAATCGGCCGTTACCGGGTATTTATGGCCGACATGTTCTTCTTCGTGATAGCCGCATTCGCCTGCGCCTTTG CCCCCAACGAGTGGGTGTTGGGCGGCGCGCGTTTTGTGATGGGGCTGGGAGTCGGCATCGATTTGCCGGTGGCCATGGCG TTTTTGGCTGAATTTTCCAAACTGTCAGGTCGTGGTAATAAAGCAGCACGTATCGCCATGTGGTGCCCCACCTGGTATGC CGCAATCAGTATCTCTTATTTGCTGGTGTTGCTGCTGTATGCGGTACTGCCAGAGAGCCACACCGACTGGCTGTGGCGGC TGATCCTCGGCTTCGGAGCCGTTCCGGCGCTGGTGATCATCGCCATTCGCAGTCGCTATATGAGCGAATCTCCAGTGTGG GCCGCCAATCAGGGCGACCTCGACGGCGCTGCTGCCATTTTACGTCGTTCCTATAATATCAACGCCGTGGTGGCGAAAGA TGCCGAACGGGGTAAACCGATGCAGGCGCGGCGTGCCTCATGGCGCAACTACGGCACGCTGCTGCAAGGGGTTTATCTGC GGCGCACGGTACTGGCCACCGTTATCGCCGTCGCCTCGTCGTTCGCCTATAACGCCGTGGCATTCGGGTTGCCGGTGATC CTATCGAGTTTTCTGGCGCAGTCGATGCTCAGCACGATTCTGGTATCGCTGGCGTTGAACCTGTTGTTCGCCTTTGTCGG CGGGCTAATTGCTGTGCGACTGGTTCCGACGTACGGCGCGTGGAAGATGACGGTGCTGGGCTACGCTTTTCAACTGGCGG CGCTGTTGGGGTTGGCGCTGATTGGTCGGCCGGACAGCGGCACGGAGGCGGCGGTCTCCATCGGTATGTTGGCGCTGTTC CTGCTGGGCCAGGGATTCGGGCCGGGCTCGCACAGTATGACCTTCGCCTCGCTCAGTTACCCCACCTCGCTGCGTGGGGT AGGTGTCGGCTTCAACCAAACGCTGATGCGTTCCAGTTCGACCCTGTCACTGTTCTTGTTCCCGGTGCTGTCCGCCGCGC TGGGTACCGGCGTTTTTTGGGTGATTGCCATTGCCCCGCTCGCCGGGCTGATTGCGCTGTTGTCAATTCGCTGGGAGCCG TCGGGCTACGATGTGGATGCAGAAGACTTCCAGCCGCGTTAA
Upstream 100 bases:
>100_bases TTTCAACAACCTTGGGTTGTATGCTTATAACCAGAAAGAATTGGTGAGCGCCTGTTACCCGCCGTTATGCTCAGATTTTT GCTTATTAAGTAGAAATATC
Downstream 100 bases:
>100_bases GTAAAACGGGCTTCGTCATGAAGCCCGCTGTCCGCGCTACAGCCGGCCAGTAACTTACTTAGTTATTAAGTTACTGGCTT AGTAAGTTAATAGATTGTGA
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MSSYIAASDAANSAGNTDLPTGEVVTLRSAADVSTLVNGGAAKSNNARIVVAIALGGVFLDAYDLGALAFGIKDVAREFN LSPTGTGLIASAITFGAIIGAFIGGYLTDKIGRYRVFMADMFFFVIAAFACAFAPNEWVLGGARFVMGLGVGIDLPVAMA FLAEFSKLSGRGNKAARIAMWCPTWYAAISISYLLVLLLYAVLPESHTDWLWRLILGFGAVPALVIIAIRSRYMSESPVW AANQGDLDGAAAILRRSYNINAVVAKDAERGKPMQARRASWRNYGTLLQGVYLRRTVLATVIAVASSFAYNAVAFGLPVI LSSFLAQSMLSTILVSLALNLLFAFVGGLIAVRLVPTYGAWKMTVLGYAFQLAALLGLALIGRPDSGTEAAVSIGMLALF LLGQGFGPGSHSMTFASLSYPTSLRGVGVGFNQTLMRSSSTLSLFLFPVLSAALGTGVFWVIAIAPLAGLIALLSIRWEP SGYDVDAEDFQPR
Sequences:
>Translated_493_residues MSSYIAASDAANSAGNTDLPTGEVVTLRSAADVSTLVNGGAAKSNNARIVVAIALGGVFLDAYDLGALAFGIKDVAREFN LSPTGTGLIASAITFGAIIGAFIGGYLTDKIGRYRVFMADMFFFVIAAFACAFAPNEWVLGGARFVMGLGVGIDLPVAMA FLAEFSKLSGRGNKAARIAMWCPTWYAAISISYLLVLLLYAVLPESHTDWLWRLILGFGAVPALVIIAIRSRYMSESPVW AANQGDLDGAAAILRRSYNINAVVAKDAERGKPMQARRASWRNYGTLLQGVYLRRTVLATVIAVASSFAYNAVAFGLPVI LSSFLAQSMLSTILVSLALNLLFAFVGGLIAVRLVPTYGAWKMTVLGYAFQLAALLGLALIGRPDSGTEAAVSIGMLALF LLGQGFGPGSHSMTFASLSYPTSLRGVGVGFNQTLMRSSSTLSLFLFPVLSAALGTGVFWVIAIAPLAGLIALLSIRWEP SGYDVDAEDFQPR >Mature_492_residues SSYIAASDAANSAGNTDLPTGEVVTLRSAADVSTLVNGGAAKSNNARIVVAIALGGVFLDAYDLGALAFGIKDVAREFNL SPTGTGLIASAITFGAIIGAFIGGYLTDKIGRYRVFMADMFFFVIAAFACAFAPNEWVLGGARFVMGLGVGIDLPVAMAF LAEFSKLSGRGNKAARIAMWCPTWYAAISISYLLVLLLYAVLPESHTDWLWRLILGFGAVPALVIIAIRSRYMSESPVWA ANQGDLDGAAAILRRSYNINAVVAKDAERGKPMQARRASWRNYGTLLQGVYLRRTVLATVIAVASSFAYNAVAFGLPVIL SSFLAQSMLSTILVSLALNLLFAFVGGLIAVRLVPTYGAWKMTVLGYAFQLAALLGLALIGRPDSGTEAAVSIGMLALFL LGQGFGPGSHSMTFASLSYPTSLRGVGVGFNQTLMRSSSTLSLFLFPVLSAALGTGVFWVIAIAPLAGLIALLSIRWEPS GYDVDAEDFQPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786229, Length=394, Percent_Identity=24.8730964467005, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI87082159, Length=408, Percent_Identity=25, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1788068, Length=246, Percent_Identity=28.4552845528455, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1788074, Length=268, Percent_Identity=27.9850746268657, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1789207, Length=439, Percent_Identity=25.7403189066059, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI1789312, Length=442, Percent_Identity=24.6606334841629, Blast_Score=72, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17565978, Length=247, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320705, Length=203, Percent_Identity=25.1231527093596, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR003663 - InterPro: IPR005829 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 52058; Mature: 51927
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSYIAASDAANSAGNTDLPTGEVVTLRSAADVSTLVNGGAAKSNNARIVVAIALGGVFL CCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCCEEEEEEEECCHHH DAYDLGALAFGIKDVAREFNLSPTGTGLIASAITFGAIIGAFIGGYLTDKIGRYRVFMAD HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFFFVIAAFACAFAPNEWVLGGARFVMGLGVGIDLPVAMAFLAEFSKLSGRGNKAARIAM HHHHHHHHHHHHCCCCCEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE WCPTWYAAISISYLLVLLLYAVLPESHTDWLWRLILGFGAVPALVIIAIRSRYMSESPVW ECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCC AANQGDLDGAAAILRRSYNINAVVAKDAERGKPMQARRASWRNYGTLLQGVYLRRTVLAT CCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VIAVASSFAYNAVAFGLPVILSSFLAQSMLSTILVSLALNLLFAFVGGLIAVRLVPTYGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WKMTVLGYAFQLAALLGLALIGRPDSGTEAAVSIGMLALFLLGQGFGPGSHSMTFASLSY HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC PTSLRGVGVGFNQTLMRSSSTLSLFLFPVLSAALGTGVFWVIAIAPLAGLIALLSIRWEP CCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC SGYDVDAEDFQPR CCCCCCCCCCCCC >Mature Secondary Structure SSYIAASDAANSAGNTDLPTGEVVTLRSAADVSTLVNGGAAKSNNARIVVAIALGGVFL CCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCCEEEEEEEECCHHH DAYDLGALAFGIKDVAREFNLSPTGTGLIASAITFGAIIGAFIGGYLTDKIGRYRVFMAD HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFFFVIAAFACAFAPNEWVLGGARFVMGLGVGIDLPVAMAFLAEFSKLSGRGNKAARIAM HHHHHHHHHHHHCCCCCEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE WCPTWYAAISISYLLVLLLYAVLPESHTDWLWRLILGFGAVPALVIIAIRSRYMSESPVW ECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCC AANQGDLDGAAAILRRSYNINAVVAKDAERGKPMQARRASWRNYGTLLQGVYLRRTVLAT CCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VIAVASSFAYNAVAFGLPVILSSFLAQSMLSTILVSLALNLLFAFVGGLIAVRLVPTYGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WKMTVLGYAFQLAALLGLALIGRPDSGTEAAVSIGMLALFLLGQGFGPGSHSMTFASLSY HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC PTSLRGVGVGFNQTLMRSSSTLSLFLFPVLSAALGTGVFWVIAIAPLAGLIALLSIRWEP CCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC SGYDVDAEDFQPR CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]