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The map label for this gene is 157369676

Identifier: 157369676

GI number: 157369676

Start: 1563416

End: 1565647

Strand: Reverse

Name: 157369676

Synonym: Spro_1433

Alternate gene names: NA

Gene position: 1565647-1563416 (Counterclockwise)

Preceding gene: 157369677

Following gene: 157369675

Centisome position: 28.73

GC content: 60.53

Gene sequence:

>2232_bases
ATGAAACCTATCACCTCCGACCGGCCCGAGCCGATAAGCAGCCTTGGAAACAGCATTGCGCAGGCGATTGATTGGGTGGC
GGCCACCCGGCAGCAGTCCACTCGGCTAAACCGGGAAGCCGATAACCTGACTGTCCGTCTGCGCCGCAGCTATAACCGGG
CCAGGCAGTTGGACAGCGCCATGCATCAGCCTCTGGCCATCGGCCTCTATGGTCATAACGCCGCGGCCAAGGCCCACTTG
TTGGCCACACTGGCACCCGGTGCCAGGCTATTGAGCGAAGATGCCACGCTGGCGGTACGCTACAGCTGTTGTGACACCCA
AAATCCTCCGTCTTACCCTGTTGCCGTTTCCCTGCTGGATGAGGCGCAGTTGGTTGCCATGATGATCGGCAGCGCATTGA
TGGGCGGTTTTCGTCCGGATTGGAATGCCGGTGCCATGGCCGCACATTCGCACGCACTAGAGCGTCTCCGCCAACCGATG
GCTATTGGCGGGCTGGACAGTAACGCGATGGTGGCGCTGTGGGACCACCTTGGTCATCAGGGCGGTAAATGGCAAACGCC
GCTGGCGAGACACTTCTGGCCACATGCCATCTCACTGGCACCCTATTTGAGCGTTGACGACCGTGCCAGGCTGTTCGCAC
CGCTTTGGGGCGAGGACCCGGCACTGACAAGTTGTTATCGCCAGTTGGCGCATACCCTGCACGCCCTGGGCCACTGCGAG
CGCCTGTATGCTCCCCACCAGGTATTGAGCCAGGATGAGGGGATTGCGCATGCCCAGGCGATCCATGCATCGGCCGGGGA
AAAACTGACCGTGCTGACAGAAAATGGCGTCGAGGTAACGATCGCGCTGGCCGATCTGGCGTGGTTGGCGGCCTCGGTCA
CGACAACCTTGCCAGCGAGGGGAAACCTCGGGTTACCGAACAACATCGAGCTGCTAAACCTGCCGGCCGCCAACCCATGC
CCGGGTGCTGGGCTGATACAACGCATGCAGCAGGCAAAACGCGCCAATCTGCTGACTCTCGCTGCCGACGGCCTGCATGC
CAGTCTGCTTCTGGTAAGCGATGCGGCCCTTACGCCACAAGATGCCGGCCGTACGGGCAACGCGCTGGCCTACTGGGTCA
GACAAACCCAGGGGGAAACCGTGGAACTACGCAGCCGCCGCAAACCGGGTTTAATCTGGGCAATCACCGCGTTCGACTCA
CGTCAGGAAGGGAAACCGCGCCCCGACGACGCCGTTCAACGCTATGTCGGCGAACCGGGCGAAAGTTGGGCCACCCTGCT
GGCGATCGATGAAAGCGACTGCCAGCGCATGGTGACCTGGTTGGCGACGCAGGCGTCCCCGACATTGAAGCAGGATCGCA
TCCTTGAACAACAGCAGGAACTGCAACGCGAACTGACTGAGAGCCTGCTCGGCAACTGGCTGCACGCCGCGGACACGCCG
TTAACGCAGCAGCGCACCCAGCAGTTACTGCGCAAATTGCAGGCACAGGCAGGAATACACGGTGAACTGCTCGAGTGGCT
GCTGCCGCAGTGCGATACCCTGCGCCAGCTGTATAGCCAACAACAGCATAACTTGTCCGCGCCGGTGGTCGCTGCCCCGG
CGTTTGATGTTGAGATCGATCTGTTTGACGAGGGAGATATGGCCTGCGTGGCCCCCATCGGGCAAAACAATGATTCGTTT
GCCCAGCGGGTATTTGCCGATTGGATAAACCATCTGCGCAGCCTGCCGGACAATAACCAACTGCTGACATTGCTGGGTGT
CGGCAAGCAGCATCTGGAGATGCTGGTCGACGCGCTAATCACCGCTGCCTGCCGCCTGGAAATTGCCGAATCACTGGAGC
GCGCATTGTCTGCCGGAGCACTGCCTGAACAGGCTGAAGACAGGCAGGTCAGCCAGGCGTTAGCGATATTGGGAGATTTC
GTCACCTGGTTGGGCTTCCAGCAGCGCGAGGCGAGGTTACGCCCCGCCAGCCGAATCAATCACGGCCAACCCATATTTAC
CCCTCCACCGCAGCCCGCCGTGGACTGGAGTAGCCAGCAACGGTTAACCAAACTGGCACCGACCCCGGCGAGAAATACCG
CGTTTTATATCTATGACTGGTTGGTTGGCCTGCAGGCGCTGTTGGCGGAGAATGTGGCAACCAAGGCGAAAGGCACAATC
GATGAAGCTGCACATCGGGCTTTGGCCGCCATTGTCGCCCCCCTGAACGCCGAGGCAACGCCAATTATTTAA

Upstream 100 bases:

>100_bases
CGGTGCCCGCAGATAGCCTGCAACTAAAACTCAATACCTTGGCTGCCAGCGCCTCTGGCGCAACCCATTATTGGATTGAC
AGCGGGAGCATTTATCAGCA

Downstream 100 bases:

>100_bases
GGTATAGTGAAAAACCGTTTTCACCACAGGCGAATAATAACGATGAACTCTCCGTTTCTGGTTACTCCGCAATGGCTTGC
GCAGCATATCAACGATGAAA

Product: putative virulence factor

Products: NA

Alternate protein names: Virulence Effector SrfC; Virulence Factor SrfC; Virulence Protein; Virulence Effector Protein; Virulence Factor SrfC-Like Protein; Type III Secretion System Effector; HopL1 Protein; Protein Conserved In Bacteria Virulence Factor; Type III Effector Protein; Coiled-Coil Structure

Number of amino acids: Translated: 743; Mature: 743

Protein sequence:

>743_residues
MKPITSDRPEPISSLGNSIAQAIDWVAATRQQSTRLNREADNLTVRLRRSYNRARQLDSAMHQPLAIGLYGHNAAAKAHL
LATLAPGARLLSEDATLAVRYSCCDTQNPPSYPVAVSLLDEAQLVAMMIGSALMGGFRPDWNAGAMAAHSHALERLRQPM
AIGGLDSNAMVALWDHLGHQGGKWQTPLARHFWPHAISLAPYLSVDDRARLFAPLWGEDPALTSCYRQLAHTLHALGHCE
RLYAPHQVLSQDEGIAHAQAIHASAGEKLTVLTENGVEVTIALADLAWLAASVTTTLPARGNLGLPNNIELLNLPAANPC
PGAGLIQRMQQAKRANLLTLAADGLHASLLLVSDAALTPQDAGRTGNALAYWVRQTQGETVELRSRRKPGLIWAITAFDS
RQEGKPRPDDAVQRYVGEPGESWATLLAIDESDCQRMVTWLATQASPTLKQDRILEQQQELQRELTESLLGNWLHAADTP
LTQQRTQQLLRKLQAQAGIHGELLEWLLPQCDTLRQLYSQQQHNLSAPVVAAPAFDVEIDLFDEGDMACVAPIGQNNDSF
AQRVFADWINHLRSLPDNNQLLTLLGVGKQHLEMLVDALITAACRLEIAESLERALSAGALPEQAEDRQVSQALAILGDF
VTWLGFQQREARLRPASRINHGQPIFTPPPQPAVDWSSQQRLTKLAPTPARNTAFYIYDWLVGLQALLAENVATKAKGTI
DEAAHRALAAIVAPLNAEATPII

Sequences:

>Translated_743_residues
MKPITSDRPEPISSLGNSIAQAIDWVAATRQQSTRLNREADNLTVRLRRSYNRARQLDSAMHQPLAIGLYGHNAAAKAHL
LATLAPGARLLSEDATLAVRYSCCDTQNPPSYPVAVSLLDEAQLVAMMIGSALMGGFRPDWNAGAMAAHSHALERLRQPM
AIGGLDSNAMVALWDHLGHQGGKWQTPLARHFWPHAISLAPYLSVDDRARLFAPLWGEDPALTSCYRQLAHTLHALGHCE
RLYAPHQVLSQDEGIAHAQAIHASAGEKLTVLTENGVEVTIALADLAWLAASVTTTLPARGNLGLPNNIELLNLPAANPC
PGAGLIQRMQQAKRANLLTLAADGLHASLLLVSDAALTPQDAGRTGNALAYWVRQTQGETVELRSRRKPGLIWAITAFDS
RQEGKPRPDDAVQRYVGEPGESWATLLAIDESDCQRMVTWLATQASPTLKQDRILEQQQELQRELTESLLGNWLHAADTP
LTQQRTQQLLRKLQAQAGIHGELLEWLLPQCDTLRQLYSQQQHNLSAPVVAAPAFDVEIDLFDEGDMACVAPIGQNNDSF
AQRVFADWINHLRSLPDNNQLLTLLGVGKQHLEMLVDALITAACRLEIAESLERALSAGALPEQAEDRQVSQALAILGDF
VTWLGFQQREARLRPASRINHGQPIFTPPPQPAVDWSSQQRLTKLAPTPARNTAFYIYDWLVGLQALLAENVATKAKGTI
DEAAHRALAAIVAPLNAEATPII
>Mature_743_residues
MKPITSDRPEPISSLGNSIAQAIDWVAATRQQSTRLNREADNLTVRLRRSYNRARQLDSAMHQPLAIGLYGHNAAAKAHL
LATLAPGARLLSEDATLAVRYSCCDTQNPPSYPVAVSLLDEAQLVAMMIGSALMGGFRPDWNAGAMAAHSHALERLRQPM
AIGGLDSNAMVALWDHLGHQGGKWQTPLARHFWPHAISLAPYLSVDDRARLFAPLWGEDPALTSCYRQLAHTLHALGHCE
RLYAPHQVLSQDEGIAHAQAIHASAGEKLTVLTENGVEVTIALADLAWLAASVTTTLPARGNLGLPNNIELLNLPAANPC
PGAGLIQRMQQAKRANLLTLAADGLHASLLLVSDAALTPQDAGRTGNALAYWVRQTQGETVELRSRRKPGLIWAITAFDS
RQEGKPRPDDAVQRYVGEPGESWATLLAIDESDCQRMVTWLATQASPTLKQDRILEQQQELQRELTESLLGNWLHAADTP
LTQQRTQQLLRKLQAQAGIHGELLEWLLPQCDTLRQLYSQQQHNLSAPVVAAPAFDVEIDLFDEGDMACVAPIGQNNDSF
AQRVFADWINHLRSLPDNNQLLTLLGVGKQHLEMLVDALITAACRLEIAESLERALSAGALPEQAEDRQVSQALAILGDF
VTWLGFQQREARLRPASRINHGQPIFTPPPQPAVDWSSQQRLTKLAPTPARNTAFYIYDWLVGLQALLAENVATKAKGTI
DEAAHRALAAIVAPLNAEATPII

Specific function: Unknown

COG id: COG4458

COG function: function code S; Uncharacterized protein conserved in bacteria, putative virulence factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81129; Mature: 81129

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPITSDRPEPISSLGNSIAQAIDWVAATRQQSTRLNREADNLTVRLRRSYNRARQLDSA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHHH
MHQPLAIGLYGHNAAAKAHLLATLAPGARLLSEDATLAVRYSCCDTQNPPSYPVAVSLLD
HCCCEEEEEECCCHHHHHHHHHHHCCCHHHHCCCCEEEEEEEECCCCCCCCCCEEEEHHH
EAQLVAMMIGSALMGGFRPDWNAGAMAAHSHALERLRQPMAIGGLDSNAMVALWDHLGHQ
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHCCC
GGKWQTPLARHFWPHAISLAPYLSVDDRARLFAPLWGEDPALTSCYRQLAHTLHALGHCE
CCCCCCCHHHHCCCCHHHHCCCCCCCCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
RLYAPHQVLSQDEGIAHAQAIHASAGEKLTVLTENGVEVTIALADLAWLAASVTTTLPAR
HHCCCHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHCCCCC
GNLGLPNNIELLNLPAANPCPGAGLIQRMQQAKRANLLTLAADGLHASLLLVSDAALTPQ
CCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCC
DAGRTGNALAYWVRQTQGETVELRSRRKPGLIWAITAFDSRQEGKPRPDDAVQRYVGEPG
CCCCCCCHHEEEEHHCCCCEEHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCC
ESWATLLAIDESDCQRMVTWLATQASPTLKQDRILEQQQELQRELTESLLGNWLHAADTP
CCCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LTQQRTQQLLRKLQAQAGIHGELLEWLLPQCDTLRQLYSQQQHNLSAPVVAAPAFDVEID
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEE
LFDEGDMACVAPIGQNNDSFAQRVFADWINHLRSLPDNNQLLTLLGVGKQHLEMLVDALI
EECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
TAACRLEIAESLERALSAGALPEQAEDRQVSQALAILGDFVTWLGFQQREARLRPASRIN
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHCC
HGQPIFTPPPQPAVDWSSQQRLTKLAPTPARNTAFYIYDWLVGLQALLAENVATKAKGTI
CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCH
DEAAHRALAAIVAPLNAEATPII
HHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKPITSDRPEPISSLGNSIAQAIDWVAATRQQSTRLNREADNLTVRLRRSYNRARQLDSA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHHH
MHQPLAIGLYGHNAAAKAHLLATLAPGARLLSEDATLAVRYSCCDTQNPPSYPVAVSLLD
HCCCEEEEEECCCHHHHHHHHHHHCCCHHHHCCCCEEEEEEEECCCCCCCCCCEEEEHHH
EAQLVAMMIGSALMGGFRPDWNAGAMAAHSHALERLRQPMAIGGLDSNAMVALWDHLGHQ
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHCCC
GGKWQTPLARHFWPHAISLAPYLSVDDRARLFAPLWGEDPALTSCYRQLAHTLHALGHCE
CCCCCCCHHHHCCCCHHHHCCCCCCCCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
RLYAPHQVLSQDEGIAHAQAIHASAGEKLTVLTENGVEVTIALADLAWLAASVTTTLPAR
HHCCCHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHCCCCC
GNLGLPNNIELLNLPAANPCPGAGLIQRMQQAKRANLLTLAADGLHASLLLVSDAALTPQ
CCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCC
DAGRTGNALAYWVRQTQGETVELRSRRKPGLIWAITAFDSRQEGKPRPDDAVQRYVGEPG
CCCCCCCHHEEEEHHCCCCEEHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCC
ESWATLLAIDESDCQRMVTWLATQASPTLKQDRILEQQQELQRELTESLLGNWLHAADTP
CCCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LTQQRTQQLLRKLQAQAGIHGELLEWLLPQCDTLRQLYSQQQHNLSAPVVAAPAFDVEID
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEE
LFDEGDMACVAPIGQNNDSFAQRVFADWINHLRSLPDNNQLLTLLGVGKQHLEMLVDALI
EECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
TAACRLEIAESLERALSAGALPEQAEDRQVSQALAILGDFVTWLGFQQREARLRPASRIN
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHCC
HGQPIFTPPPQPAVDWSSQQRLTKLAPTPARNTAFYIYDWLVGLQALLAENVATKAKGTI
CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCH
DEAAHRALAAIVAPLNAEATPII
HHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA