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The map label for this gene is kdpE [H]

Identifier: 157369487

GI number: 157369487

Start: 1368151

End: 1368840

Strand: Reverse

Name: kdpE [H]

Synonym: Spro_1244

Alternate gene names: 157369487

Gene position: 1368840-1368151 (Counterclockwise)

Preceding gene: 157369488

Following gene: 157369482

Centisome position: 25.12

GC content: 56.81

Gene sequence:

>690_bases
GTGAGCAACACGCCAACCAATATTCTGATTGTTGAAGATGAAAAAGAGATCCGGCGTTTCGTCCGTACCGCCCTGGAAAG
TGAAGGCCTGCGGGTGTTTGAAAGCGAAACGCTGCAACGCGGGCTGATTGAAGCCGGCACGCGTAAACCGGATCTGATTA
TTCTCGATTTGGGGTTGCCGGACGGCGACGGGCTTAACTATATCCGCGATTTACGCCAATGGAGCGCCATTCCGGTGATC
GTGTTGTCGGCACGCAACGCTGAGGAAGACAAAATCGCCGCGCTGGACGCCGGGGCGGATGACTATCTCAGCAAGCCATT
TGGTATTGGCGAATTGCTGGCGCGCGTGCGGGTCGCGTTGCGACGTCATTCCGGTAGCCTGCAGGAAAGCCCGTTGGTCA
GCTTCTCAGAAATCACCGTAGATCTGATTAATCGCCGGGTGCTGCGCCAGGGGGAAGATTTGCATCTGACGCCAATAGAG
TTTCGACTGCTGGCCGAGTTGCTGGCCAACTCCGGCAAGGTGTTGACCCAGCGGCAGCTTCTTAGCCACGTGTGGGGGCC
GAACTACGTCGAACACAGCCATTATCTGCGAATTTATATGGGCCATCTGCGGCAGAAACTGGAGGCCGACCCGGCCCGGC
CAAAACACTTGCTGACCGAAACCGGCGTCGGTTACCGCTTTATGCCTTGA

Upstream 100 bases:

>100_bases
TGCCAACGGCGGTGCCAGTTTCCGCTTTGTGCTACCGCTGGAGAAACCGCCAGAAATAGACAGCGAAGCCTTTGATCTTT
AATCAAGTCCCGGGAGTCTT

Downstream 100 bases:

>100_bases
AGTTAATGGGCGCAGCATGCGGCGCCCCTACTGTTGTGGGCCTTTCTTCAACCCTATCATAAATTCCTTGAACGCTTCGC
GCAGCGGTGCAAATACCGGA

Product: DNA-binding transcriptional activator KdpE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSNTPTNILIVEDEKEIRRFVRTALESEGLRVFESETLQRGLIEAGTRKPDLIILDLGLPDGDGLNYIRDLRQWSAIPVI
VLSARNAEEDKIAALDAGADDYLSKPFGIGELLARVRVALRRHSGSLQESPLVSFSEITVDLINRRVLRQGEDLHLTPIE
FRLLAELLANSGKVLTQRQLLSHVWGPNYVEHSHYLRIYMGHLRQKLEADPARPKHLLTETGVGYRFMP

Sequences:

>Translated_229_residues
MSNTPTNILIVEDEKEIRRFVRTALESEGLRVFESETLQRGLIEAGTRKPDLIILDLGLPDGDGLNYIRDLRQWSAIPVI
VLSARNAEEDKIAALDAGADDYLSKPFGIGELLARVRVALRRHSGSLQESPLVSFSEITVDLINRRVLRQGEDLHLTPIE
FRLLAELLANSGKVLTQRQLLSHVWGPNYVEHSHYLRIYMGHLRQKLEADPARPKHLLTETGVGYRFMP
>Mature_228_residues
SNTPTNILIVEDEKEIRRFVRTALESEGLRVFESETLQRGLIEAGTRKPDLIILDLGLPDGDGLNYIRDLRQWSAIPVIV
LSARNAEEDKIAALDAGADDYLSKPFGIGELLARVRVALRRHSGSLQESPLVSFSEITVDLINRRVLRQGEDLHLTPIEF
RLLAELLANSGKVLTQRQLLSHVWGPNYVEHSHYLRIYMGHLRQKLEADPARPKHLLTETGVGYRFMP

Specific function: Member of the two-component regulatory system kdpD/kdpE involved in the regulation of the kdp operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=78.47533632287, Blast_Score=365, Evalue=1e-102,
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=36.7713004484305, Blast_Score=144, Evalue=6e-36,
Organism=Escherichia coli, GI1787375, Length=222, Percent_Identity=35.1351351351351, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1786784, Length=220, Percent_Identity=38.1818181818182, Blast_Score=133, Evalue=9e-33,
Organism=Escherichia coli, GI1789809, Length=232, Percent_Identity=34.051724137931, Blast_Score=130, Evalue=8e-32,
Organism=Escherichia coli, GI87082012, Length=222, Percent_Identity=33.7837837837838, Blast_Score=121, Evalue=5e-29,
Organism=Escherichia coli, GI1788394, Length=228, Percent_Identity=35.0877192982456, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1790552, Length=224, Percent_Identity=36.6071428571429, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1790860, Length=223, Percent_Identity=34.5291479820628, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=32.3275862068966, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1789402, Length=220, Percent_Identity=35, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1787229, Length=229, Percent_Identity=31.4410480349345, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI2367329, Length=208, Percent_Identity=31.25, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI145693140, Length=241, Percent_Identity=29.045643153527, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1788550, Length=118, Percent_Identity=33.0508474576271, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1790299, Length=184, Percent_Identity=28.804347826087, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25908; Mature: 25777

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTPTNILIVEDEKEIRRFVRTALESEGLRVFESETLQRGLIEAGTRKPDLIILDLGLP
CCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCC
DGDGLNYIRDLRQWSAIPVIVLSARNAEEDKIAALDAGADDYLSKPFGIGELLARVRVAL
CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCHHHHCCCCCHHHHHHHHHHHH
RRHSGSLQESPLVSFSEITVDLINRRVLRQGEDLHLTPIEFRLLAELLANSGKVLTQRQL
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCCHHHHHHH
LSHVWGPNYVEHSHYLRIYMGHLRQKLEADPARPKHLLTETGVGYRFMP
HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEECC
>Mature Secondary Structure 
SNTPTNILIVEDEKEIRRFVRTALESEGLRVFESETLQRGLIEAGTRKPDLIILDLGLP
CCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCC
DGDGLNYIRDLRQWSAIPVIVLSARNAEEDKIAALDAGADDYLSKPFGIGELLARVRVAL
CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCHHHHCCCCCHHHHHHHHHHHH
RRHSGSLQESPLVSFSEITVDLINRRVLRQGEDLHLTPIEFRLLAELLANSGKVLTQRQL
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCCHHHHHHH
LSHVWGPNYVEHSHYLRIYMGHLRQKLEADPARPKHLLTETGVGYRFMP
HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1532388; 8905232; 9278503 [H]