| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is proX [C]
Identifier: 157369047
GI number: 157369047
Start: 895890
End: 896855
Strand: Reverse
Name: proX [C]
Synonym: Spro_0802
Alternate gene names: 157369047
Gene position: 896855-895890 (Counterclockwise)
Preceding gene: 157369048
Following gene: 157369046
Centisome position: 16.46
GC content: 56.31
Gene sequence:
>966_bases ATGCAAACACGACACAAATTATGGATACCGCTGATCGCGCTCGGGCTGATGACAGGCAGCCTGTCCGCGCGCGCAGCAGG CTGGTGCGAGTCCGGCAAGCCGGTCAAATTCGCCGGACTCAACTGGGAAAGCGGCATGCTGCTGACCGACGTCATGCAAT ATGTGCTGCAAAAGGGTTACGACTGTAAAACCGACGCGCTGCCGGGTAACTCCATCACCATGGAGCAGGCAGTCGGCACC AACGACATTCAGGTGTTCGCCGAAGAGTGGATTGGCCGCAGCGAAGTCTGGAACAAGGCAGAGAAAGCCGGCAAAGCGGT CAGCGTGGGTGCGCCGATTGTCGGCGCGGTTGAAGGCTGGTACGTGCCGCGCTATGTGATTGAAGGCGATGCCAAACGCA AGTTGAAACCGCTGACGCCGGATCTGAAAAGCATCCCGGATCTCGCCAAATATGTGCAGGTATTTCGCGATCAGGAAGAA CCGGACAAAGGCCGTTTTTACAACTGCCCGGCCGGCTGGACCTGCGAACTGGATAACACCGCGATCCTCAAAAAATTCAA GCTGGACGACAAGTTCACCAACTTCCGCCCTGGCACCGGCCCGGCACTGGATACCGAGATCCTCTCCAGCTACCGTCGCG GCGAACCTATCCTGTTCTACTACTGGTCACCGACCCCAATCATGGGCCAGCTCGATCTGGTGAAACTGGAAGAACCGGGC GTGGACAAGAACATCCACATCAAGGTCGGTATTTCCAGCGTGTTTAACCAGCAGGCGCCTGAACTGGTCCAGGTGTTGTC AAAAGTGAATCTGCCGCTTGATCTGATTAACCAGAATCTGGCGCGCATGAGCAAGGAACGCATCAGCTCAGAGAAGCTGG CGCTGGAGTTCTTCAAGCAGCACCCGGAAATCTGGCAACAGTGGGTCAGCGAAGACGCAGCGAAAAAAATTCAGGCCTCC TTGTAA
Upstream 100 bases:
>100_bases CGTAAAAAAGGCGGGGGTTCACCCGTCACGTCCTCACCACAGTATTAATCTCATGAGCCCGCCGTTCCCGGGCTCTTCGT CATTAAAGTGGAGTATCACT
Downstream 100 bases:
>100_bases TCGCTTTGGCATTCAGTAAACACCAACCCGGAGCCTGTGCGCTTCGGGCCTGACAGGGGTAAATACTTATGTTTCCAGAT CGTTTTACTTTCTCCATCGC
Product: glycine betaine ABC transporter substrate-binding protein
Products: ADP; phosphate; L-proline [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MQTRHKLWIPLIALGLMTGSLSARAAGWCESGKPVKFAGLNWESGMLLTDVMQYVLQKGYDCKTDALPGNSITMEQAVGT NDIQVFAEEWIGRSEVWNKAEKAGKAVSVGAPIVGAVEGWYVPRYVIEGDAKRKLKPLTPDLKSIPDLAKYVQVFRDQEE PDKGRFYNCPAGWTCELDNTAILKKFKLDDKFTNFRPGTGPALDTEILSSYRRGEPILFYYWSPTPIMGQLDLVKLEEPG VDKNIHIKVGISSVFNQQAPELVQVLSKVNLPLDLINQNLARMSKERISSEKLALEFFKQHPEIWQQWVSEDAAKKIQAS L
Sequences:
>Translated_321_residues MQTRHKLWIPLIALGLMTGSLSARAAGWCESGKPVKFAGLNWESGMLLTDVMQYVLQKGYDCKTDALPGNSITMEQAVGT NDIQVFAEEWIGRSEVWNKAEKAGKAVSVGAPIVGAVEGWYVPRYVIEGDAKRKLKPLTPDLKSIPDLAKYVQVFRDQEE PDKGRFYNCPAGWTCELDNTAILKKFKLDDKFTNFRPGTGPALDTEILSSYRRGEPILFYYWSPTPIMGQLDLVKLEEPG VDKNIHIKVGISSVFNQQAPELVQVLSKVNLPLDLINQNLARMSKERISSEKLALEFFKQHPEIWQQWVSEDAAKKIQAS L >Mature_321_residues MQTRHKLWIPLIALGLMTGSLSARAAGWCESGKPVKFAGLNWESGMLLTDVMQYVLQKGYDCKTDALPGNSITMEQAVGT NDIQVFAEEWIGRSEVWNKAEKAGKAVSVGAPIVGAVEGWYVPRYVIEGDAKRKLKPLTPDLKSIPDLAKYVQVFRDQEE PDKGRFYNCPAGWTCELDNTAILKKFKLDDKFTNFRPGTGPALDTEILSSYRRGEPILFYYWSPTPIMGQLDLVKLEEPG VDKNIHIKVGISSVFNQQAPELVQVLSKVNLPLDLINQNLARMSKERISSEKLALEFFKQHPEIWQQWVSEDAAKKIQAS L
Specific function: Member Of A Multicomponent Binding-Protein-Dependent Transport System (The Prou Transporter) Which Serves As The Glycine Betaine/L-Proline Transporter. [C]
COG id: COG2113
COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36046; Mature: 36046
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTRHKLWIPLIALGLMTGSLSARAAGWCESGKPVKFAGLNWESGMLLTDVMQYVLQKGY CCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCC DCKTDALPGNSITMEQAVGTNDIQVFAEEWIGRSEVWNKAEKAGKAVSVGAPIVGAVEGW CCCCCCCCCCCEEHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEECCCCCEEHHCCC YVPRYVIEGDAKRKLKPLTPDLKSIPDLAKYVQVFRDQEEPDKGRFYNCPAGWTCELDNT CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEECCCH AILKKFKLDDKFTNFRPGTGPALDTEILSSYRRGEPILFYYWSPTPIMGQLDLVKLEEPG HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCC VDKNIHIKVGISSVFNQQAPELVQVLSKVNLPLDLINQNLARMSKERISSEKLALEFFKQ CCCEEEEEEEHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HPEIWQQWVSEDAAKKIQASL CHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQTRHKLWIPLIALGLMTGSLSARAAGWCESGKPVKFAGLNWESGMLLTDVMQYVLQKGY CCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCC DCKTDALPGNSITMEQAVGTNDIQVFAEEWIGRSEVWNKAEKAGKAVSVGAPIVGAVEGW CCCCCCCCCCCEEHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEECCCCCEEHHCCC YVPRYVIEGDAKRKLKPLTPDLKSIPDLAKYVQVFRDQEEPDKGRFYNCPAGWTCELDNT CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEECCCH AILKKFKLDDKFTNFRPGTGPALDTEILSSYRRGEPILFYYWSPTPIMGQLDLVKLEEPG HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCC VDKNIHIKVGISSVFNQQAPELVQVLSKVNLPLDLINQNLARMSKERISSEKLALEFFKQ CCCEEEEEEEHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HPEIWQQWVSEDAAKKIQASL CHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-proline [Periplasm]; H2O [C]
Specific reaction: ATP + L-proline [Periplasm] + H2O = ADP + phosphate + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA