| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ilvD [H]
Identifier: 157368953
GI number: 157368953
Start: 780950
End: 782662
Strand: Reverse
Name: ilvD [H]
Synonym: Spro_0708
Alternate gene names: 157368953
Gene position: 782662-780950 (Counterclockwise)
Preceding gene: 157368954
Following gene: 157368952
Centisome position: 14.36
GC content: 59.89
Gene sequence:
>1713_bases ATGAGCGGATGTGGAACCTGTGGCGGCGGCAGTTGCGGCGCGCATTTTAACCCAATCCTCGAGGGTGATGACGGTGCGCT GAAACGTGCGCTGTATAAATCGATGGGCCACAGCGACGAACAACTGCGACGCCCGGTGATCGCCGTGGTCAACAGTTATA CCAACGCCACCGCCGGCCACGTCAACCTCAATGAACTGACGGCCAGGGTATTGCAGGGTATTGAAGAAGCCGGTGGTGTC GGCATGGTGTTCGGTACTATCGCCCCCTGCGATGGCATTGCCGAAGGGCATCTTGGCATGCGCTACATCCTGGCCGCCCG CGAGGTGATCACCGCCTCAATTGAAGTGATGATGCGCGCCCATCGTTTCGACGGCATGGTACTGCTGGGATCCTGCGACA AAATTGTGCCTGCCATGCTGATGGCGGCGGCACGGCTGGACGTTCCGGCGATCATGGTCAACGGTGGCCCGATGTATCCG GCGGAATATAAAGGCAAGCACTGGGACGGCAACATCGTCACCGAAGCCATCGGCTGGAAAAAACGCGGCGAAATCGATGA GGCGGAATTCGCTCATATCGAAAATATCGCCGAGCCCGGCCCCGGTTCCTGCACCATGTACGGTACGGCTAACACCATGT GCTGTATCGGCGAAGTTTTGGGTATGAGCCTGCCGGGTAGCAGCACACTGCCGGCGGTATCCGCCGAGCGGCGCGAATGC GCTATCGAAACCGGCCGCCAGGCGGTGGCGCTGGTGCTCAACGGTATCAACGCGCGACAGATCATCACCGCGGCGTCGAT CCGCAATGCGATGATTTATCTACTGGCCACCGGCGGTTCCACCAATGCCATTCTGCATCTGCAAGCCATTCACTACGAAG CGGAATTGGGGCATCTGCCGCTGTCCGCCTTCGATGAGCTGAGCCATCAGGTGCCGCTGGTCGCATCGCTGTACCCGGCC TCCGAGCATGACATGATTGATTTCTGGGAGGCGGGCGGCGTACCGGCGGTCGAAGTTGAGATTGCCAAACTGCTCGACCT TAACGCCTTGACCGTCACCGGCAAAACCAAGGCTGAGCTACTGGCGAAGACCCCGCCAAGCCGACGTCCTGAGGTCATCC ACACCCTGGCCATTCCGGTGCGCAATGAAGCCGGCGTTGCCGTGCTGCACGGCAACCTGTCGCCGCTCGGCTGCGTGGTG AAACCGGCCGCAGTGCCCGATCACCTGATGCGTTTTAGTGGCCCCGCCGTGGTGTTCAACAGCGAGCAGGAATCGGTCGA GGCGATTATGTCCGGCCAGATTAAACCGGGCAGTGCTCTGGTGTTGCGTTACGAAGGGCCTAAAGGCGGCCCCGGCATGC CGGAAATGTATAAACCGATGAAATCACTGGAAGGTATGGGCCTGTCCGACAGTTGCGCCTTGATCACCGATGGCCGTTTT TCCGGTTCCAACCGCGGGCTGTTTGTCGGCCACATTTCACCTGAGGCGGTAGAGGGCGGCGAACTGGCACTGGTGCAGAA CGGAGACCCGATCTCCATCGATATTCCAGCTCGTACTCTAACGCTGCATGTCAGCGAGAGCGAACTGATCCTGCGACGTA AAACCTGGCAACCGCTGGATAAAGAAGTGCCACGCGGTTTCCTGCGACTTTATCGCCGCTGGGCAATGCCGGCCGCGCAG GGTGCCGTACTGGCTGACCGGGAGGAAGAATAA
Upstream 100 bases:
>100_bases TCATGCTTCCGGCCAGATTGATAAACCCAAAGATCAAACCGCATCAGGCGACTCAGCCTGATACCGAAGGCCCTTTAAAT ATCACTGAGAGATTTTAATT
Downstream 100 bases:
>100_bases TGAGCCGTTATCAAGCCGCAGATATTTGCGGCGTCAATCCTATTGTCGCTATGCCGTTTAGGGCTGACGGCGAGATAGAT GAAGCAAGCTTTGTGCGATT
Product: dihydroxy-acid dehydratase
Products: NA
Alternate protein names: DAD [H]
Number of amino acids: Translated: 570; Mature: 569
Protein sequence:
>570_residues MSGCGTCGGGSCGAHFNPILEGDDGALKRALYKSMGHSDEQLRRPVIAVVNSYTNATAGHVNLNELTARVLQGIEEAGGV GMVFGTIAPCDGIAEGHLGMRYILAAREVITASIEVMMRAHRFDGMVLLGSCDKIVPAMLMAAARLDVPAIMVNGGPMYP AEYKGKHWDGNIVTEAIGWKKRGEIDEAEFAHIENIAEPGPGSCTMYGTANTMCCIGEVLGMSLPGSSTLPAVSAERREC AIETGRQAVALVLNGINARQIITAASIRNAMIYLLATGGSTNAILHLQAIHYEAELGHLPLSAFDELSHQVPLVASLYPA SEHDMIDFWEAGGVPAVEVEIAKLLDLNALTVTGKTKAELLAKTPPSRRPEVIHTLAIPVRNEAGVAVLHGNLSPLGCVV KPAAVPDHLMRFSGPAVVFNSEQESVEAIMSGQIKPGSALVLRYEGPKGGPGMPEMYKPMKSLEGMGLSDSCALITDGRF SGSNRGLFVGHISPEAVEGGELALVQNGDPISIDIPARTLTLHVSESELILRRKTWQPLDKEVPRGFLRLYRRWAMPAAQ GAVLADREEE
Sequences:
>Translated_570_residues MSGCGTCGGGSCGAHFNPILEGDDGALKRALYKSMGHSDEQLRRPVIAVVNSYTNATAGHVNLNELTARVLQGIEEAGGV GMVFGTIAPCDGIAEGHLGMRYILAAREVITASIEVMMRAHRFDGMVLLGSCDKIVPAMLMAAARLDVPAIMVNGGPMYP AEYKGKHWDGNIVTEAIGWKKRGEIDEAEFAHIENIAEPGPGSCTMYGTANTMCCIGEVLGMSLPGSSTLPAVSAERREC AIETGRQAVALVLNGINARQIITAASIRNAMIYLLATGGSTNAILHLQAIHYEAELGHLPLSAFDELSHQVPLVASLYPA SEHDMIDFWEAGGVPAVEVEIAKLLDLNALTVTGKTKAELLAKTPPSRRPEVIHTLAIPVRNEAGVAVLHGNLSPLGCVV KPAAVPDHLMRFSGPAVVFNSEQESVEAIMSGQIKPGSALVLRYEGPKGGPGMPEMYKPMKSLEGMGLSDSCALITDGRF SGSNRGLFVGHISPEAVEGGELALVQNGDPISIDIPARTLTLHVSESELILRRKTWQPLDKEVPRGFLRLYRRWAMPAAQ GAVLADREEE >Mature_569_residues SGCGTCGGGSCGAHFNPILEGDDGALKRALYKSMGHSDEQLRRPVIAVVNSYTNATAGHVNLNELTARVLQGIEEAGGVG MVFGTIAPCDGIAEGHLGMRYILAAREVITASIEVMMRAHRFDGMVLLGSCDKIVPAMLMAAARLDVPAIMVNGGPMYPA EYKGKHWDGNIVTEAIGWKKRGEIDEAEFAHIENIAEPGPGSCTMYGTANTMCCIGEVLGMSLPGSSTLPAVSAERRECA IETGRQAVALVLNGINARQIITAASIRNAMIYLLATGGSTNAILHLQAIHYEAELGHLPLSAFDELSHQVPLVASLYPAS EHDMIDFWEAGGVPAVEVEIAKLLDLNALTVTGKTKAELLAKTPPSRRPEVIHTLAIPVRNEAGVAVLHGNLSPLGCVVK PAAVPDHLMRFSGPAVVFNSEQESVEAIMSGQIKPGSALVLRYEGPKGGPGMPEMYKPMKSLEGMGLSDSCALITDGRFS GSNRGLFVGHISPEAVEGGELALVQNGDPISIDIPARTLTLHVSESELILRRKTWQPLDKEVPRGFLRLYRRWAMPAAQG AVLADREEE
Specific function: Valine and isoleucine biosynthesis; fourth step. [C]
COG id: COG0129
COG function: function code EG; Dihydroxyacid dehydratase/phosphogluconate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ilvD/edd family [H]
Homologues:
Organism=Escherichia coli, GI48994964, Length=593, Percent_Identity=39.7976391231029, Blast_Score=391, Evalue=1e-110, Organism=Escherichia coli, GI1788157, Length=520, Percent_Identity=35.5769230769231, Blast_Score=233, Evalue=3e-62, Organism=Escherichia coli, GI2367371, Length=467, Percent_Identity=32.3340471092077, Blast_Score=177, Evalue=2e-45, Organism=Escherichia coli, GI1786464, Length=503, Percent_Identity=31.013916500994, Blast_Score=174, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6322476, Length=551, Percent_Identity=37.5680580762251, Blast_Score=333, Evalue=6e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015928 - InterPro: IPR004404 - InterPro: IPR000581 - InterPro: IPR020558 [H]
Pfam domain/function: PF00920 ILVD_EDD [H]
EC number: =4.2.1.9 [H]
Molecular weight: Translated: 60644; Mature: 60512
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00886 ILVD_EDD_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGCGTCGGGSCGAHFNPILEGDDGALKRALYKSMGHSDEQLRRPVIAVVNSYTNATAGH CCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHCHHHHHHHCCCCCCCCC VNLNELTARVLQGIEEAGGVGMVFGTIAPCDGIAEGHLGMRYILAAREVITASIEVMMRA CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH HRFDGMVLLGSCDKIVPAMLMAAARLDVPAIMVNGGPMYPAEYKGKHWDGNIVTEAIGWK HHCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEHHHCCC KRGEIDEAEFAHIENIAEPGPGSCTMYGTANTMCCIGEVLGMSLPGSSTLPAVSAERREC CCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHH AIETGRQAVALVLNGINARQIITAASIRNAMIYLLATGGSTNAILHLQAIHYEAELGHLP HHHCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEEEEEEHHCCCCC LSAFDELSHQVPLVASLYPASEHDMIDFWEAGGVPAVEVEIAKLLDLNALTVTGKTKAEL HHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCCCCEEEEEHHHHHCCCEEEECCCHHHHH LAKTPPSRRPEVIHTLAIPVRNEAGVAVLHGNLSPLGCVVKPAAVPDHLMRFSGPAVVFN HCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCEEEECCCCHHHHHHCCCCEEEEC SEQESVEAIMSGQIKPGSALVLRYEGPKGGPGMPEMYKPMKSLEGMGLSDSCALITDGRF CCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCC SGSNRGLFVGHISPEAVEGGELALVQNGDPISIDIPARTLTLHVSESELILRRKTWQPLD CCCCCCEEEECCCCCCCCCCCEEEEECCCEEEEEECCEEEEEEECCCCEEEECCCCCCHH KEVPRGFLRLYRRWAMPAAQGAVLADREEE HHHHHHHHHHHHHHCCCCCCCCEECCCCCC >Mature Secondary Structure SGCGTCGGGSCGAHFNPILEGDDGALKRALYKSMGHSDEQLRRPVIAVVNSYTNATAGH CCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHCHHHHHHHCCCCCCCCC VNLNELTARVLQGIEEAGGVGMVFGTIAPCDGIAEGHLGMRYILAAREVITASIEVMMRA CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH HRFDGMVLLGSCDKIVPAMLMAAARLDVPAIMVNGGPMYPAEYKGKHWDGNIVTEAIGWK HHCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEHHHCCC KRGEIDEAEFAHIENIAEPGPGSCTMYGTANTMCCIGEVLGMSLPGSSTLPAVSAERREC CCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHH AIETGRQAVALVLNGINARQIITAASIRNAMIYLLATGGSTNAILHLQAIHYEAELGHLP HHHCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEEEEEEHHCCCCC LSAFDELSHQVPLVASLYPASEHDMIDFWEAGGVPAVEVEIAKLLDLNALTVTGKTKAEL HHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCCCCEEEEEHHHHHCCCEEEECCCHHHHH LAKTPPSRRPEVIHTLAIPVRNEAGVAVLHGNLSPLGCVVKPAAVPDHLMRFSGPAVVFN HCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCEEEECCCCHHHHHHCCCCEEEEC SEQESVEAIMSGQIKPGSALVLRYEGPKGGPGMPEMYKPMKSLEGMGLSDSCALITDGRF CCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCC SGSNRGLFVGHISPEAVEGGELALVQNGDPISIDIPARTLTLHVSESELILRRKTWQPLD CCCCCCEEEECCCCCCCCCCCEEEEECCCEEEEEECCEEEEEEECCCCEEEECCCCCCHH KEVPRGFLRLYRRWAMPAAQGAVLADREEE HHHHHHHHHHHHHHCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA