Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is puuA [H]
Identifier: 157368829
GI number: 157368829
Start: 649019
End: 650416
Strand: Reverse
Name: puuA [H]
Synonym: Spro_0584
Alternate gene names: 157368829
Gene position: 650416-649019 (Counterclockwise)
Preceding gene: 157368831
Following gene: 157368828
Centisome position: 11.94
GC content: 60.66
Gene sequence:
>1398_bases ATGGCCTCACGAGACGGATGTTTCATGTATTCTAATATTATTGGCTTCAACCCAATGCTGGCGGATATTACCGCCGCGCA GCCACGTCCCTTTGGCAAGGAAGTTGAACAGTATTTACAGCGTTATCCGGATACCGAACACGTCGATATTTATCTCAACG ATTTAAACGGTCAATTCCGTGGCAAACGGCTGCCGGTCGCCGAGTTGTTCGGGCTGGAAAAGGGCTGCTATTTCCCGCTG TCGATCTACGCCATGGATCTCGCAGGCCAGGTCATTGAAGAAAGCGGGCTGGGTCAGCAGACCGGGGAGCCGGACAGGTT GTGCCTGCCGGTACCGGGCACATTGCGTCCCTGCGCCCGTGACCCACAGCACCACGCTCAGTTGCTGCTGACGATGAAAA ATGCCGAAGGTGAGGCCTGCGAACTGGAACCGCGCGTGGTGCTGCAACAGATTCTCAAACGCCTGCAGGCCAAAGGCTAC TACCCGGTGATCGCGGCAGAACTGGAGTTTTATCTGCATGATCCGCAGCAACAGCCCGCCGTTGCCGGCCAGTGCCCGAC GCAAAGTTTTTCTGTCGATGCCCCGGAACGCCACCACGCCCTGCTCAACGACATCGAGCATCAGGCCAGACTGCAGGCGC TGCCGCTAACCGGCGTGGTGGCCGAGGCGGCCTCCGGTCAGTACGAACTGAACCTGCACCACAGTGCCCGGGTGCTGGAA GCCTGCGACCAGGTGCTGGCCCTGAAACGGCTAACGCGCCAGATAGCGGAGAAACACCACCAGCACGCCTGCTTTATGGC CAAACCCTGCGCGCAATCCGCCGGCAGCGGTTTGCACTTTCATATCAGCCTGCAGGATGAACAGGGCAACAACCTGCTGA CCGGCGCTCCGGGCGAACTGAGCGACAACATGCAACAGGCGATGGCCGGAATGCTGGCATTGATGCCGGCCTCGATGGCC ATCCTGGCACCGAACGTCAACGCCTTCCGCCGTTTTCGCCCGGGTATGCATGTGCCACTGCGTGCCTCCTGGGGGCACAA CAACCGCACCGTCGCACTACGCCTGCCCTGTGCCGACAGCGCCAACCAACGTATTGAATACCGGTTGGCCGGGGCCGACG CCAATCCTTATCTGGCGGTGGCGATAATACTCGGCGGCCTATTGCACGGGCTGGAGCAGCCCCTGCCGTTGCCCCCGAGC ACCAACGGCTATGAAAACGACAGCGCCGCACCACTGCCACTCAACCAGCGGGAGGCACTTACGCTGTTTCGCCGCTGTCA GCCGCTGCGCGAGCTGCTTGGCCCGGCCTTTTGCACCCTGTGGTACACCTGCAAAACCGCCGAACTGCGCCGCTTTGAAG GGCAGGTCACCGCCGCGGAAGTCAGTTGGATGCTTTAA
Upstream 100 bases:
>100_bases GACGCATTATTTACATTTTTTTTATTCCGGGCGGAAATAAAGTTACTGCGTTTTTACAGACAGTTTTTAGGGCCACGGAT AACATCATTACATCGCCAAT
Downstream 100 bases:
>100_bases CCCGCCGGGTTCTGCATTCATCGGGCGAATATATTCGCCCCATAATTGAACAAGGAACAAAACATGTCTCGTTTGGTTTT GATCTCGAATAAACAGTGTG
Product: glutamine synthetase catalytic region
Products: NA
Alternate protein names: Gamma-Glu-Put synthetase; Glutamate--putrescine ligase [H]
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MASRDGCFMYSNIIGFNPMLADITAAQPRPFGKEVEQYLQRYPDTEHVDIYLNDLNGQFRGKRLPVAELFGLEKGCYFPL SIYAMDLAGQVIEESGLGQQTGEPDRLCLPVPGTLRPCARDPQHHAQLLLTMKNAEGEACELEPRVVLQQILKRLQAKGY YPVIAAELEFYLHDPQQQPAVAGQCPTQSFSVDAPERHHALLNDIEHQARLQALPLTGVVAEAASGQYELNLHHSARVLE ACDQVLALKRLTRQIAEKHHQHACFMAKPCAQSAGSGLHFHISLQDEQGNNLLTGAPGELSDNMQQAMAGMLALMPASMA ILAPNVNAFRRFRPGMHVPLRASWGHNNRTVALRLPCADSANQRIEYRLAGADANPYLAVAIILGGLLHGLEQPLPLPPS TNGYENDSAAPLPLNQREALTLFRRCQPLRELLGPAFCTLWYTCKTAELRRFEGQVTAAEVSWML
Sequences:
>Translated_465_residues MASRDGCFMYSNIIGFNPMLADITAAQPRPFGKEVEQYLQRYPDTEHVDIYLNDLNGQFRGKRLPVAELFGLEKGCYFPL SIYAMDLAGQVIEESGLGQQTGEPDRLCLPVPGTLRPCARDPQHHAQLLLTMKNAEGEACELEPRVVLQQILKRLQAKGY YPVIAAELEFYLHDPQQQPAVAGQCPTQSFSVDAPERHHALLNDIEHQARLQALPLTGVVAEAASGQYELNLHHSARVLE ACDQVLALKRLTRQIAEKHHQHACFMAKPCAQSAGSGLHFHISLQDEQGNNLLTGAPGELSDNMQQAMAGMLALMPASMA ILAPNVNAFRRFRPGMHVPLRASWGHNNRTVALRLPCADSANQRIEYRLAGADANPYLAVAIILGGLLHGLEQPLPLPPS TNGYENDSAAPLPLNQREALTLFRRCQPLRELLGPAFCTLWYTCKTAELRRFEGQVTAAEVSWML >Mature_464_residues ASRDGCFMYSNIIGFNPMLADITAAQPRPFGKEVEQYLQRYPDTEHVDIYLNDLNGQFRGKRLPVAELFGLEKGCYFPLS IYAMDLAGQVIEESGLGQQTGEPDRLCLPVPGTLRPCARDPQHHAQLLLTMKNAEGEACELEPRVVLQQILKRLQAKGYY PVIAAELEFYLHDPQQQPAVAGQCPTQSFSVDAPERHHALLNDIEHQARLQALPLTGVVAEAASGQYELNLHHSARVLEA CDQVLALKRLTRQIAEKHHQHACFMAKPCAQSAGSGLHFHISLQDEQGNNLLTGAPGELSDNMQQAMAGMLALMPASMAI LAPNVNAFRRFRPGMHVPLRASWGHNNRTVALRLPCADSANQRIEYRLAGADANPYLAVAIILGGLLHGLEQPLPLPPST NGYENDSAAPLPLNQREALTLFRRCQPLRELLGPAFCTLWYTCKTAELRRFEGQVTAAEVSWML
Specific function: Involved in the breakdown of putrescine via the biosynthesis of gamma-L-glutamylputrescine [H]
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=433, Percent_Identity=24.0184757505774, Blast_Score=84, Evalue=4e-16, Organism=Escherichia coli, GI87081870, Length=470, Percent_Identity=51.063829787234, Blast_Score=485, Evalue=1e-138, Organism=Escherichia coli, GI1790301, Length=175, Percent_Identity=30.2857142857143, Blast_Score=84, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 [H]
Pfam domain/function: PF00120 Gln-synt_C [H]
EC number: =6.3.1.11 [H]
Molecular weight: Translated: 51403; Mature: 51271
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRDGCFMYSNIIGFNPMLADITAAQPRPFGKEVEQYLQRYPDTEHVDIYLNDLNGQFR CCCCCCCEEEHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCC GKRLPVAELFGLEKGCYFPLSIYAMDLAGQVIEESGLGQQTGEPDRLCLPVPGTLRPCAR CCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCC DPQHHAQLLLTMKNAEGEACELEPRVVLQQILKRLQAKGYYPVIAAELEFYLHDPQQQPA CHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCC VAGQCPTQSFSVDAPERHHALLNDIEHQARLQALPLTGVVAEAASGQYELNLHHSARVLE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECHHHHHHH ACDQVLALKRLTRQIAEKHHQHACFMAKPCAQSAGSGLHFHISLQDEQGNNLLTGAPGEL HHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHHCCCCEEEEEEEECCCCCEEEECCCCHH SDNMQQAMAGMLALMPASMAILAPNVNAFRRFRPGMHVPLRASWGHNNRTVALRLPCADS HHHHHHHHHHHHHHHHCCCEEECCCHHHHHHCCCCCCCEEEECCCCCCCEEEEEECCCCC ANQRIEYRLAGADANPYLAVAIILGGLLHGLEQPLPLPPSTNGYENDSAAPLPLNQREAL CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH TLFRRCQPLRELLGPAFCTLWYTCKTAELRRFEGQVTAAEVSWML HHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHCCCEEEEEEEECC >Mature Secondary Structure ASRDGCFMYSNIIGFNPMLADITAAQPRPFGKEVEQYLQRYPDTEHVDIYLNDLNGQFR CCCCCCEEEHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCC GKRLPVAELFGLEKGCYFPLSIYAMDLAGQVIEESGLGQQTGEPDRLCLPVPGTLRPCAR CCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCC DPQHHAQLLLTMKNAEGEACELEPRVVLQQILKRLQAKGYYPVIAAELEFYLHDPQQQPA CHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCC VAGQCPTQSFSVDAPERHHALLNDIEHQARLQALPLTGVVAEAASGQYELNLHHSARVLE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECHHHHHHH ACDQVLALKRLTRQIAEKHHQHACFMAKPCAQSAGSGLHFHISLQDEQGNNLLTGAPGEL HHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHHCCCCEEEEEEEECCCCCEEEECCCCHH SDNMQQAMAGMLALMPASMAILAPNVNAFRRFRPGMHVPLRASWGHNNRTVALRLPCADS HHHHHHHHHHHHHHHHCCCEEECCCHHHHHHCCCCCCCEEEECCCCCCCEEEEEECCCCC ANQRIEYRLAGADANPYLAVAIILGGLLHGLEQPLPLPPSTNGYENDSAAPLPLNQREAL CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH TLFRRCQPLRELLGPAFCTLWYTCKTAELRRFEGQVTAAEVSWML HHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]