Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is otsA [H]
Identifier: 157368828
GI number: 157368828
Start: 648308
End: 648955
Strand: Reverse
Name: otsA [H]
Synonym: Spro_0583
Alternate gene names: 157368828
Gene position: 648955-648308 (Counterclockwise)
Preceding gene: 157368829
Following gene: 157368827
Centisome position: 11.91
GC content: 57.87
Gene sequence:
>648_bases ATGTCTCGTTTGGTTTTGATCTCGAATAAACAGTGTGACAGCAAAGACCTGGCCTGCGCCACGCAGGCGCTATCCTCCGT TGACGCCAGCGATGATGAGCAAGGCCTGTGGCTGGGCTGGAACGGCGACGTGCAGAACTTTGGCGCCGCGCCGCTGCGCC CGGTCAGCCATCAGCACCGCAGCGGCTATCAGCAAGTGACCTTTCCGCTGTCGACCGAAGAGTTTCACTTCCACTATCAG GGTTACTATCACGATGGCCTGTGGCCGGTGTTCCATAACCACCCGGAGAAGGCGCATTTCACGGCCGAGAACTACCGCGC TTACCGCCAGCTCAACCAGCACTTCGCCGATATCGCCTGCGAGTATGTGTGCCCGAACGACATCATCTGCATTGATGATT ATCAGCTGCTGCCCTGCGGCCAGGCGCTGAAGGAACAGGGGCTGTTGAACCCCTGCGCGTTCTTCTTCCATTTGCCGTTC CCGTCGGCGGCGCTGCTCAGGCAGATCCCCGAGCACCAGGGGTTAATCGAGTCGCTATTTTTCTACGACCTGATTGGCTT TCAGTCGCTGGACGATCGCAACAACTTCCTCAATTATCTGGCCAATGAACCCGGTCGAGATGCTGCCCGACGATCGACTG CAGGTTAA
Upstream 100 bases:
>100_bases GCAGGTCACCGCCGCGGAAGTCAGTTGGATGCTTTAACCCGCCGGGTTCTGCATTCATCGGGCGAATATATTCGCCCCAT AATTGAACAAGGAACAAAAC
Downstream 100 bases:
>100_bases CGGCCATATCTTTGCCACCGGCATCTTCCCGGCCGGGATCAACGCCCGCAACATCTACTGACCCACCGCCCGGTTGGCGT TGCCGCACAGCGCCCAACCG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Osmoregulatory trehalose synthesis protein A; Trehalose-6-phosphate synthase; UDP-glucose-glucosephosphate glucosyltransferase [H]
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MSRLVLISNKQCDSKDLACATQALSSVDASDDEQGLWLGWNGDVQNFGAAPLRPVSHQHRSGYQQVTFPLSTEEFHFHYQ GYYHDGLWPVFHNHPEKAHFTAENYRAYRQLNQHFADIACEYVCPNDIICIDDYQLLPCGQALKEQGLLNPCAFFFHLPF PSAALLRQIPEHQGLIESLFFYDLIGFQSLDDRNNFLNYLANEPGRDAARRSTAG
Sequences:
>Translated_215_residues MSRLVLISNKQCDSKDLACATQALSSVDASDDEQGLWLGWNGDVQNFGAAPLRPVSHQHRSGYQQVTFPLSTEEFHFHYQ GYYHDGLWPVFHNHPEKAHFTAENYRAYRQLNQHFADIACEYVCPNDIICIDDYQLLPCGQALKEQGLLNPCAFFFHLPF PSAALLRQIPEHQGLIESLFFYDLIGFQSLDDRNNFLNYLANEPGRDAARRSTAG >Mature_214_residues SRLVLISNKQCDSKDLACATQALSSVDASDDEQGLWLGWNGDVQNFGAAPLRPVSHQHRSGYQQVTFPLSTEEFHFHYQG YYHDGLWPVFHNHPEKAHFTAENYRAYRQLNQHFADIACEYVCPNDIICIDDYQLLPCGQALKEQGLLNPCAFFFHLPFP SAALLRQIPEHQGLIESLFFYDLIGFQSLDDRNNFLNYLANEPGRDAARRSTAG
Specific function: Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor [H]
COG id: COG0380
COG function: function code G; Trehalose-6-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
Organism=Escherichia coli, GI1788206, Length=204, Percent_Identity=32.3529411764706, Blast_Score=113, Evalue=1e-26, Organism=Caenorhabditis elegans, GI115533558, Length=157, Percent_Identity=26.1146496815287, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI115533560, Length=157, Percent_Identity=26.1146496815287, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6319602, Length=141, Percent_Identity=32.6241134751773, Blast_Score=84, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6323917, Length=137, Percent_Identity=28.4671532846715, Blast_Score=76, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6323537, Length=137, Percent_Identity=29.1970802919708, Blast_Score=73, Evalue=3e-14, Organism=Drosophila melanogaster, GI19920676, Length=185, Percent_Identity=28.6486486486486, Blast_Score=78, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001830 - InterPro: IPR012766 [H]
Pfam domain/function: PF00982 Glyco_transf_20 [H]
EC number: =2.4.1.15 [H]
Molecular weight: Translated: 24499; Mature: 24368
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLVLISNKQCDSKDLACATQALSSVDASDDEQGLWLGWNGDVQNFGAAPLRPVSHQHR CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHH SGYQQVTFPLSTEEFHFHYQGYYHDGLWPVFHNHPEKAHFTAENYRAYRQLNQHFADIAC CCCEEEEEECCCCEEEEEEEEEEECCCCHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHE EYVCPNDIICIDDYQLLPCGQALKEQGLLNPCAFFFHLPFPSAALLRQIPEHQGLIESLF HEECCCCEEEECCCEECCCCHHHHHCCCCCHHHHEEECCCCHHHHHHHCCHHHHHHHHHH FYDLIGFQSLDDRNNFLNYLANEPGRDAARRSTAG HHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHCCCC >Mature Secondary Structure SRLVLISNKQCDSKDLACATQALSSVDASDDEQGLWLGWNGDVQNFGAAPLRPVSHQHR CCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHH SGYQQVTFPLSTEEFHFHYQGYYHDGLWPVFHNHPEKAHFTAENYRAYRQLNQHFADIAC CCCEEEEEECCCCEEEEEEEEEEECCCCHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHE EYVCPNDIICIDDYQLLPCGQALKEQGLLNPCAFFFHLPFPSAALLRQIPEHQGLIESLF HEECCCCEEEECCCEECCCCHHHHHCCCCCHHHHEEECCCCHHHHHHHCCHHHHHHHHHH FYDLIGFQSLDDRNNFLNYLANEPGRDAARRSTAG HHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA