Click here to switch to the map view.

The map label for this gene is yjiA [H]

Identifier: 157368825

GI number: 157368825

Start: 644582

End: 645544

Strand: Reverse

Name: yjiA [H]

Synonym: Spro_0580

Alternate gene names: 157368825

Gene position: 645544-644582 (Counterclockwise)

Preceding gene: 157368826

Following gene: 157368823

Centisome position: 11.85

GC content: 58.67

Gene sequence:

>963_bases
ATGAAACCCATCGCAGTCACCATTCTGACCGGCTTTTTGGGCGCCGGTAAAACCACCCTGCTCCGCCATATTCTCAACGC
CGAACACGGCTACAAGATTGCTGTGATTGAAAACGAATTCGGCGAAGTGCCAATCGACAATGCATTGATTGGCGATCGCG
CCAGCCGCATCACCACCCTGAGCAACGGCTGCATCTGCTGCAGTAAATCCAACGAGCTGGCTGACGCGCTGCTGGACTTG
CTGGACGGTGTCGCTCAGGGCCAACTGGAGTTCGACCGGCTGATCATCGAATGCACCGGCATGGCCGATCCCGGCCCGAT
CACCCAGACCTTTTTCTCGCACGAAATCCTCTGCGAACGCTTCCTGCTGGACGGCATCATTACCCTGGTGGACGCCGCAC
ATGCCGATCAACAACTCAACCAGTTCAGCATCGCGCAGGCGCAGGTGGGCTACGCCGACCGTATTCTGCTGACCAAAACC
GACGTGGCGCCGGACTGTGAAGCGCTGACCCAACGGCTGCAACAGATGAACGCCCGCGCCCCGGTTTATAAAGTGACGCA
CGGCGATATCGATCTGGGCGTGCTGTTCGACATCGAAGGCTTTGTGCTGAACGACAAGCTGAACCTGACGCCGCCAACTC
CCCTGTTTCGCCGCATTCCGCAGGCGCAAAACAACATTCAGTCGATTGTGGTGTACCACGAACAACCGCTGGAGCTGATG
CAGGTTTCCGAAGTGATGGAAGGCCTGCTGCTGGAATACGCCGACAGCCTGCTGCGTTATAAGGGCATTTTGTCGATCAA
AGACGAGCCGCGCCGCCTGCTGTTCCAGGGCGTGCAACGGCTGTATAACGCCGACTGGGACCGCGAGTGGCTGCCCGACG
AGGAACGCCGCAGTACGCTGGTGTTTATTGGCGTGGACTTACCGGAGGAGACGATCCGGGAGCGGTTTGCCGGGTTGGGT
TGA

Upstream 100 bases:

>100_bases
GCCGGTAATGACCTATAAAGAGTTTTTCCGCGAACGCCAGCAGGCCCGCTACGGTGGGGACGGCAAAGGCGGCATGCGCT
GTTGTTAACAAGGACCTGTA

Downstream 100 bases:

>100_bases
GATAGCGATATTGCGTTCACCGCGCACCACGGTCAACGCCAGCAGCAGCGCGCAGGCGCTACTCGTCATCAGTACGATGC
CCGGCCGCTGCGCCAACCCG

Product: putative GTP-binding protein YjiA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MKPIAVTILTGFLGAGKTTLLRHILNAEHGYKIAVIENEFGEVPIDNALIGDRASRITTLSNGCICCSKSNELADALLDL
LDGVAQGQLEFDRLIIECTGMADPGPITQTFFSHEILCERFLLDGIITLVDAAHADQQLNQFSIAQAQVGYADRILLTKT
DVAPDCEALTQRLQQMNARAPVYKVTHGDIDLGVLFDIEGFVLNDKLNLTPPTPLFRRIPQAQNNIQSIVVYHEQPLELM
QVSEVMEGLLLEYADSLLRYKGILSIKDEPRRLLFQGVQRLYNADWDREWLPDEERRSTLVFIGVDLPEETIRERFAGLG

Sequences:

>Translated_320_residues
MKPIAVTILTGFLGAGKTTLLRHILNAEHGYKIAVIENEFGEVPIDNALIGDRASRITTLSNGCICCSKSNELADALLDL
LDGVAQGQLEFDRLIIECTGMADPGPITQTFFSHEILCERFLLDGIITLVDAAHADQQLNQFSIAQAQVGYADRILLTKT
DVAPDCEALTQRLQQMNARAPVYKVTHGDIDLGVLFDIEGFVLNDKLNLTPPTPLFRRIPQAQNNIQSIVVYHEQPLELM
QVSEVMEGLLLEYADSLLRYKGILSIKDEPRRLLFQGVQRLYNADWDREWLPDEERRSTLVFIGVDLPEETIRERFAGLG
>Mature_320_residues
MKPIAVTILTGFLGAGKTTLLRHILNAEHGYKIAVIENEFGEVPIDNALIGDRASRITTLSNGCICCSKSNELADALLDL
LDGVAQGQLEFDRLIIECTGMADPGPITQTFFSHEILCERFLLDGIITLVDAAHADQQLNQFSIAQAQVGYADRILLTKT
DVAPDCEALTQRLQQMNARAPVYKVTHGDIDLGVLFDIEGFVLNDKLNLTPPTPLFRRIPQAQNNIQSIVVYHEQPLELM
QVSEVMEGLLLEYADSLLRYKGILSIKDEPRRLLFQGVQRLYNADWDREWLPDEERRSTLVFIGVDLPEETIRERFAGLG

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI126722884, Length=339, Percent_Identity=32.4483775811209, Blast_Score=159, Evalue=4e-39,
Organism=Homo sapiens, GI33469141, Length=339, Percent_Identity=32.4483775811209, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI148727351, Length=339, Percent_Identity=32.4483775811209, Blast_Score=155, Evalue=6e-38,
Organism=Homo sapiens, GI146231952, Length=344, Percent_Identity=31.9767441860465, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI223941779, Length=335, Percent_Identity=31.6417910447761, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI223941776, Length=329, Percent_Identity=31.306990881459, Blast_Score=145, Evalue=6e-35,
Organism=Homo sapiens, GI119120938, Length=326, Percent_Identity=29.4478527607362, Blast_Score=129, Evalue=3e-30,
Organism=Homo sapiens, GI310124603, Length=223, Percent_Identity=26.9058295964126, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI87082430, Length=319, Percent_Identity=69.9059561128527, Blast_Score=440, Evalue=1e-125,
Organism=Escherichia coli, GI1788499, Length=206, Percent_Identity=32.0388349514563, Blast_Score=80, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6324356, Length=226, Percent_Identity=33.6283185840708, Blast_Score=112, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 35762; Mature: 35762

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIAVTILTGFLGAGKTTLLRHILNAEHGYKIAVIENEFGEVPIDNALIGDRASRITTL
CCCEEEEHHHHHHCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHCCCHHHEEEE
SNGCICCSKSNELADALLDLLDGVAQGQLEFDRLIIECTGMADPGPITQTFFSHEILCER
CCCEEEECCCCHHHHHHHHHHHHHHCCCHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHH
FLLDGIITLVDAAHADQQLNQFSIAQAQVGYADRILLTKTDVAPDCEALTQRLQQMNARA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCC
PVYKVTHGDIDLGVLFDIEGFVLNDKLNLTPPTPLFRRIPQAQNNIQSIVVYHEQPLELM
CEEEEECCCEEEEEEEEECCEEEECCCCCCCCCHHHHHCCHHHCCCEEEEEECCCCHHHH
QVSEVMEGLLLEYADSLLRYKGILSIKDEPRRLLFQGVQRLYNADWDREWLPDEERRSTL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCEE
VFIGVDLPEETIRERFAGLG
EEEECCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKPIAVTILTGFLGAGKTTLLRHILNAEHGYKIAVIENEFGEVPIDNALIGDRASRITTL
CCCEEEEHHHHHHCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHCCCHHHEEEE
SNGCICCSKSNELADALLDLLDGVAQGQLEFDRLIIECTGMADPGPITQTFFSHEILCER
CCCEEEECCCCHHHHHHHHHHHHHHCCCHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHH
FLLDGIITLVDAAHADQQLNQFSIAQAQVGYADRILLTKTDVAPDCEALTQRLQQMNARA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCC
PVYKVTHGDIDLGVLFDIEGFVLNDKLNLTPPTPLFRRIPQAQNNIQSIVVYHEQPLELM
CEEEEECCCEEEEEEEEECCEEEECCCCCCCCCHHHHHCCHHHCCCEEEEEECCCCHHHH
QVSEVMEGLLLEYADSLLRYKGILSIKDEPRRLLFQGVQRLYNADWDREWLPDEERRSTL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCEE
VFIGVDLPEETIRERFAGLG
EEEECCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]