| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is ascB [H]
Identifier: 157368820
GI number: 157368820
Start: 638360
End: 639790
Strand: Reverse
Name: ascB [H]
Synonym: Spro_0575
Alternate gene names: 157368820
Gene position: 639790-638360 (Counterclockwise)
Preceding gene: 157368821
Following gene: 157368819
Centisome position: 11.74
GC content: 60.03
Gene sequence:
>1431_bases ATGTCTGATTCAACTTTCCCGCAAGGGTTTTTATGGGGCGGCGCCCTGGCCGCCAACCAGTCTGAAGGGGGTTATCGCGA GGGCGGCAAAGGGCTGACCACGGTTGACATGATCCCGCATGGCCCCAACCGCATGCCGGTAAAGCTCGGCCTGGAGAAGC GTTTTGCCCTGCGCGAAGACGAGTTTTACCCCAGCCACGACGCGATTGATTTTTACCACCGCTACCGCGACGACATTGCG CTGATGGCGGAGATGGGCTTTAGCGTATTCCGCACCTCCATTGCCTGGAGCCGGATTTACCCGAACGGCGACGAGCTGAC GCCCAACCCGGAAGGCATCGCCTTCTACCGCAGCCTGTTCAAAGAGTGCCGTAAATACGGCATCGAGCCGCTGGTGACGC TGTGCCATTTCGACGTGCCAATGCACCTGGTGACCGAATACGGCTCCTGGCGCAGCCGCAAGATGGTGGAGTTTTTCACC CGCTATGCCCGCACCTGCTTCGAAGCCTTCGACGGATTGGTGAAGTATTGGCTCACCTTCAACGAGATCAACATTGTGCT GCACAGCCCGTTCTCCGGCGCAGGGTTGGTGTTTGAGGCGGACGAGAACCCCGAACAGGTAAAATACCAGGCCGTGCACC ACGAACTAATTGCCAGCGCACTGGCGACCCGCATCGCGCACGAGGTGAACCCCGCCAACCAGGTGGGCTGCATGCTGGCG GGCGGCAATTTTTACCCCTGGTCCAGCAAGCCGGAAGACGTGTGGGCCGCGCTGGAGAAAGACCGCGAGAACCTGTTCTT TATCGACGTGCAGGCCCGCGGTGCCTACCCTTCTTATTCTGCCCGGGTATTCCGCGAGAAAGGCGTGAGCATCGCGATGG AGGAAGGCGACGCCGATATCCTGAAGAACACCGTCGATTTTGTCTCCTTCAGCTATTACGCCTCGCGCTGCGCGTCTGCC GATATGAACGACAACAACAGCAGCGCCGCCAACGTGGTGAAATCCCTGACCAACCCGCATATTCCGCGCAGTGACTGGGG CTGGGGCATCGATCCGTTGGGTTTGCGCATCACCATGAACATGATGTACGACCGCTACCAAAAACCGCTATTCCTGGTGG AAAACGGCCTGGGCGCGCACGACGAGTTCAATGCCGACGGCGAGATCGCCGACGATTACCGCATCAGCTACCTGCGGGAG CATATCCGCGCCATGGCCGACGCCATCGCCGACGGCGTGCCGGTGATGGGCTACACCACCTGGGGCTGCATTGACCTGGT GGCGGCATCGACCGGGGAAATGAGCAAGCGCTACGGCCTGGTTTACGTCGACCGTGACGACCACGGCAACGGCACCCTCA CCCGCACGCGCAAGAAATCTTTCTGGTGGTACAAGCAGGTGATTGCCAGTAATGGGGCGGATTTGGGGTGA
Upstream 100 bases:
>100_bases TTGGGCTTTGAAGACATTCCGGAAAACGAAGAGGCCCCAACGACAACCGCGCCTGCGGCCAATACCGCTAACGCTACCCA CTGAGACAATTGAGGATTGC
Downstream 100 bases:
>100_bases TGGGGTTGGGGGGGTGAGTACCGATGCTGGTGATAGTTGCGAGCTGGATTCCAGACTGAGTAGTAAGCCCCTGTAATTCT ATCCAGGTTGTTTTTTAGCC
Product: cryptic 6-phospho-beta-glucosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MSDSTFPQGFLWGGALAANQSEGGYREGGKGLTTVDMIPHGPNRMPVKLGLEKRFALREDEFYPSHDAIDFYHRYRDDIA LMAEMGFSVFRTSIAWSRIYPNGDELTPNPEGIAFYRSLFKECRKYGIEPLVTLCHFDVPMHLVTEYGSWRSRKMVEFFT RYARTCFEAFDGLVKYWLTFNEINIVLHSPFSGAGLVFEADENPEQVKYQAVHHELIASALATRIAHEVNPANQVGCMLA GGNFYPWSSKPEDVWAALEKDRENLFFIDVQARGAYPSYSARVFREKGVSIAMEEGDADILKNTVDFVSFSYYASRCASA DMNDNNSSAANVVKSLTNPHIPRSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAHDEFNADGEIADDYRISYLRE HIRAMADAIADGVPVMGYTTWGCIDLVAASTGEMSKRYGLVYVDRDDHGNGTLTRTRKKSFWWYKQVIASNGADLG
Sequences:
>Translated_476_residues MSDSTFPQGFLWGGALAANQSEGGYREGGKGLTTVDMIPHGPNRMPVKLGLEKRFALREDEFYPSHDAIDFYHRYRDDIA LMAEMGFSVFRTSIAWSRIYPNGDELTPNPEGIAFYRSLFKECRKYGIEPLVTLCHFDVPMHLVTEYGSWRSRKMVEFFT RYARTCFEAFDGLVKYWLTFNEINIVLHSPFSGAGLVFEADENPEQVKYQAVHHELIASALATRIAHEVNPANQVGCMLA GGNFYPWSSKPEDVWAALEKDRENLFFIDVQARGAYPSYSARVFREKGVSIAMEEGDADILKNTVDFVSFSYYASRCASA DMNDNNSSAANVVKSLTNPHIPRSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAHDEFNADGEIADDYRISYLRE HIRAMADAIADGVPVMGYTTWGCIDLVAASTGEMSKRYGLVYVDRDDHGNGTLTRTRKKSFWWYKQVIASNGADLG >Mature_475_residues SDSTFPQGFLWGGALAANQSEGGYREGGKGLTTVDMIPHGPNRMPVKLGLEKRFALREDEFYPSHDAIDFYHRYRDDIAL MAEMGFSVFRTSIAWSRIYPNGDELTPNPEGIAFYRSLFKECRKYGIEPLVTLCHFDVPMHLVTEYGSWRSRKMVEFFTR YARTCFEAFDGLVKYWLTFNEINIVLHSPFSGAGLVFEADENPEQVKYQAVHHELIASALATRIAHEVNPANQVGCMLAG GNFYPWSSKPEDVWAALEKDRENLFFIDVQARGAYPSYSARVFREKGVSIAMEEGDADILKNTVDFVSFSYYASRCASAD MNDNNSSAANVVKSLTNPHIPRSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAHDEFNADGEIADDYRISYLREH IRAMADAIADGVPVMGYTTWGCIDLVAASTGEMSKRYGLVYVDRDDHGNGTLTRTRKKSFWWYKQVIASNGADLG
Specific function: Can hydrolyze salicin, cellobiose, and probably arbutin [H]
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI110681710, Length=503, Percent_Identity=30.0198807157058, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI32481206, Length=495, Percent_Identity=29.4949494949495, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI13273313, Length=493, Percent_Identity=26.9776876267748, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI24497614, Length=487, Percent_Identity=28.1314168377823, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI28376633, Length=483, Percent_Identity=24.8447204968944, Blast_Score=130, Evalue=2e-30, Organism=Escherichia coli, GI1789070, Length=472, Percent_Identity=85.1694915254237, Blast_Score=863, Evalue=0.0, Organism=Escherichia coli, GI2367270, Length=470, Percent_Identity=53.6170212765957, Blast_Score=528, Evalue=1e-151, Organism=Escherichia coli, GI2367174, Length=478, Percent_Identity=50.2092050209205, Blast_Score=498, Evalue=1e-142, Organism=Caenorhabditis elegans, GI17552856, Length=488, Percent_Identity=31.3524590163934, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17539390, Length=496, Percent_Identity=30.241935483871, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI21356577, Length=499, Percent_Identity=25.0501002004008, Blast_Score=132, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.86 [H]
Molecular weight: Translated: 53764; Mature: 53633
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1 ; PS00653 GLYCOSYL_HYDROL_F1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSTFPQGFLWGGALAANQSEGGYREGGKGLTTVDMIPHGPNRMPVKLGLEKRFALRED CCCCCCCCCEEECCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCHHHHHCCCC EFYPSHDAIDFYHRYRDDIALMAEMGFSVFRTSIAWSRIYPNGDELTPNPEGIAFYRSLF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH KECRKYGIEPLVTLCHFDVPMHLVTEYGSWRSRKMVEFFTRYARTCFEAFDGLVKYWLTF HHHHHCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEE NEINIVLHSPFSGAGLVFEADENPEQVKYQAVHHELIASALATRIAHEVNPANQVGCMLA EEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE GGNFYPWSSKPEDVWAALEKDRENLFFIDVQARGAYPSYSARVFREKGVSIAMEEGDADI CCEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCHHH LKNTVDFVSFSYYASRCASADMNDNNSSAANVVKSLTNPHIPRSDWGWGIDPLGLRITMN HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHH MMYDRYQKPLFLVENGLGAHDEFNADGEIADDYRISYLREHIRAMADAIADGVPVMGYTT HHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH WGCIDLVAASTGEMSKRYGLVYVDRDDHGNGTLTRTRKKSFWWYKQVIASNGADLG HHHHHHHHCCCCCHHHHCCEEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SDSTFPQGFLWGGALAANQSEGGYREGGKGLTTVDMIPHGPNRMPVKLGLEKRFALRED CCCCCCCCEEECCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCHHHHHCCCC EFYPSHDAIDFYHRYRDDIALMAEMGFSVFRTSIAWSRIYPNGDELTPNPEGIAFYRSLF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH KECRKYGIEPLVTLCHFDVPMHLVTEYGSWRSRKMVEFFTRYARTCFEAFDGLVKYWLTF HHHHHCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEE NEINIVLHSPFSGAGLVFEADENPEQVKYQAVHHELIASALATRIAHEVNPANQVGCMLA EEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE GGNFYPWSSKPEDVWAALEKDRENLFFIDVQARGAYPSYSARVFREKGVSIAMEEGDADI CCEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCHHH LKNTVDFVSFSYYASRCASADMNDNNSSAANVVKSLTNPHIPRSDWGWGIDPLGLRITMN HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHH MMYDRYQKPLFLVENGLGAHDEFNADGEIADDYRISYLREHIRAMADAIADGVPVMGYTT HHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH WGCIDLVAASTGEMSKRYGLVYVDRDDHGNGTLTRTRKKSFWWYKQVIASNGADLG HHHHHHHHCCCCCHHHHCCEEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1630307; 9278503 [H]