| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is phnL [H]
Identifier: 157368763
GI number: 157368763
Start: 569174
End: 569878
Strand: Reverse
Name: phnL [H]
Synonym: Spro_0516
Alternate gene names: 157368763
Gene position: 569878-569174 (Counterclockwise)
Preceding gene: 157368764
Following gene: 157368762
Centisome position: 10.46
GC content: 60.71
Gene sequence:
>705_bases ATGACTATTCAAATCCGGGTTGAACACCTCAGCAAAACCTTTGTGCTCCACCAGCAGCACGGCACGCAACTGCCGGTGCT GCACGATGCCAACATGACGGTCAGCAGCGGCGAATGCGTGGTGCTGCACGGGCATTCCGGCAGCGGAAAATCCACTCTGC TACGCTCACTGTACGCCAACTATCTGCCTGATAGCGGCCATATCTGGGTTAATCACCAGGGTGAATGGCTGGATATGGTG CAGGCCGAAGCGCGTCAGATCCTGGCGGTACGCCGCCATACCCTTGGCTGGGTCAGCCAGTTTCTGCGGGTGATCCCGCG TATCAGCGCGCTGGACGTAGTGATGCAGCCGTTGCTGGAACAGGGTGTCAACCGCGCCGAATGCCGCGAACGCGCCGAGA CGCTGCTCAATCAGCTCAATGTGCCGCAACGCCTGTGGCAGTTGGCCCCCTCCACCTTCTCTGGCGGTGAACAACAGCGG GTGAACATCGCTCGCGGCTTTATCGTCGATTACCCGATCCTGTTGCTGGACGAACCGACCGCCTCCCTCGACAGCCGCAA CAGCGCGGCGGTGGTCGCACTGATCGAGCAGGCCAAACAACGTGGCGCGGCGATCGTCGGTATTTTCCATGATGAAGGCG TCCGCCAGCAGGTCGCCGACCGGTTATATGACATGCAGGCGCCACAGGCGCTGGAGATCCTCTGA
Upstream 100 bases:
>100_bases GTGGAAAGCGGCCTGACCGACCGGGTGCTGGACGATCCGCACCATCCTTATACCCAACTGCTGGTTTCTTCGGTGCTGTC GTAACGCAAGGTAATTACAG
Downstream 100 bases:
>100_bases TGATCATCAATAACGTGAAACTGGTGCTGGAAGATCAAACCGTCGAAGGATCGCTGGAGGTCAGCGACGGCATGATCCGC AGCTTTGCCGATACGCCCAG
Product: phosphonate C-P lyase system protein PhnL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTIQIRVEHLSKTFVLHQQHGTQLPVLHDANMTVSSGECVVLHGHSGSGKSTLLRSLYANYLPDSGHIWVNHQGEWLDMV QAEARQILAVRRHTLGWVSQFLRVIPRISALDVVMQPLLEQGVNRAECRERAETLLNQLNVPQRLWQLAPSTFSGGEQQR VNIARGFIVDYPILLLDEPTASLDSRNSAAVVALIEQAKQRGAAIVGIFHDEGVRQQVADRLYDMQAPQALEIL
Sequences:
>Translated_234_residues MTIQIRVEHLSKTFVLHQQHGTQLPVLHDANMTVSSGECVVLHGHSGSGKSTLLRSLYANYLPDSGHIWVNHQGEWLDMV QAEARQILAVRRHTLGWVSQFLRVIPRISALDVVMQPLLEQGVNRAECRERAETLLNQLNVPQRLWQLAPSTFSGGEQQR VNIARGFIVDYPILLLDEPTASLDSRNSAAVVALIEQAKQRGAAIVGIFHDEGVRQQVADRLYDMQAPQALEIL >Mature_233_residues TIQIRVEHLSKTFVLHQQHGTQLPVLHDANMTVSSGECVVLHGHSGSGKSTLLRSLYANYLPDSGHIWVNHQGEWLDMVQ AEARQILAVRRHTLGWVSQFLRVIPRISALDVVMQPLLEQGVNRAECRERAETLLNQLNVPQRLWQLAPSTFSGGEQQRV NIARGFIVDYPILLLDEPTASLDSRNSAAVVALIEQAKQRGAAIVGIFHDEGVRQQVADRLYDMQAPQALEIL
Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates. Probably responsible for energy coupling to the transport system [H]
COG id: COG4778
COG function: function code P; ABC-type phosphonate transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI116734710, Length=210, Percent_Identity=26.1904761904762, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI255708477, Length=191, Percent_Identity=32.9842931937173, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI42741659, Length=193, Percent_Identity=31.6062176165803, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI9961250, Length=190, Percent_Identity=30, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI4505771, Length=190, Percent_Identity=30, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI9961252, Length=190, Percent_Identity=30, Blast_Score=69, Evalue=5e-12, Organism=Escherichia coli, GI1790534, Length=223, Percent_Identity=73.0941704035874, Blast_Score=344, Evalue=3e-96, Organism=Escherichia coli, GI87081834, Length=210, Percent_Identity=35.2380952380952, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1787029, Length=198, Percent_Identity=35.8585858585859, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1786703, Length=208, Percent_Identity=37.5, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1788225, Length=224, Percent_Identity=33.0357142857143, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1787105, Length=204, Percent_Identity=32.843137254902, Blast_Score=97, Evalue=6e-22, Organism=Escherichia coli, GI1789873, Length=207, Percent_Identity=31.4009661835749, Blast_Score=97, Evalue=7e-22, Organism=Escherichia coli, GI1787089, Length=201, Percent_Identity=31.8407960199005, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1789672, Length=213, Percent_Identity=32.3943661971831, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1789032, Length=255, Percent_Identity=29.0196078431373, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI48994997, Length=211, Percent_Identity=30.8056872037915, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1788644, Length=212, Percent_Identity=31.6037735849057, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1787500, Length=220, Percent_Identity=29.0909090909091, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789962, Length=203, Percent_Identity=29.5566502463054, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1790544, Length=223, Percent_Identity=35.4260089686099, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1789891, Length=212, Percent_Identity=30.6603773584906, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI48995001, Length=225, Percent_Identity=30.2222222222222, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786398, Length=218, Percent_Identity=28.4403669724771, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786872, Length=208, Percent_Identity=30.2884615384615, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788450, Length=213, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI48994883, Length=217, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=6e-15, Organism=Escherichia coli, GI1787759, Length=219, Percent_Identity=30.1369863013699, Blast_Score=74, Evalue=6e-15, Organism=Escherichia coli, GI1788761, Length=224, Percent_Identity=30.3571428571429, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI145693107, Length=238, Percent_Identity=28.1512605042017, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1789593, Length=195, Percent_Identity=30.2564102564103, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI87081709, Length=209, Percent_Identity=29.1866028708134, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI87081791, Length=237, Percent_Identity=27.8481012658228, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1788897, Length=190, Percent_Identity=28.9473684210526, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1790739, Length=238, Percent_Identity=26.4705882352941, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1790525, Length=207, Percent_Identity=28.0193236714976, Blast_Score=67, Evalue=7e-13, Organism=Escherichia coli, GI1788506, Length=195, Percent_Identity=28.2051282051282, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1787370, Length=203, Percent_Identity=30.0492610837438, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1790467, Length=203, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786345, Length=206, Percent_Identity=29.126213592233, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788472, Length=191, Percent_Identity=27.7486910994764, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787712, Length=193, Percent_Identity=29.5336787564767, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789963, Length=208, Percent_Identity=30.2884615384615, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI87082267, Length=161, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1786319, Length=210, Percent_Identity=27.6190476190476, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1789991, Length=229, Percent_Identity=24.8908296943231, Blast_Score=64, Evalue=6e-12, Organism=Escherichia coli, GI87082268, Length=219, Percent_Identity=26.9406392694064, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1790162, Length=188, Percent_Identity=28.1914893617021, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787758, Length=205, Percent_Identity=26.3414634146341, Blast_Score=63, Evalue=1e-11, Organism=Escherichia coli, GI1790190, Length=191, Percent_Identity=26.7015706806283, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17558664, Length=210, Percent_Identity=29.5238095238095, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115533608, Length=235, Percent_Identity=24.6808510638298, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6323217, Length=219, Percent_Identity=26.9406392694064, Blast_Score=70, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6322640, Length=214, Percent_Identity=30.8411214953271, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI19920532, Length=223, Percent_Identity=28.2511210762332, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24580930, Length=223, Percent_Identity=28.2511210762332, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24659289, Length=188, Percent_Identity=30.8510638297872, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24666092, Length=218, Percent_Identity=26.605504587156, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24650853, Length=161, Percent_Identity=31.6770186335404, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24650855, Length=161, Percent_Identity=31.6770186335404, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI281362751, Length=182, Percent_Identity=30.2197802197802, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR012701 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 26159; Mature: 26028
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIQIRVEHLSKTFVLHQQHGTQLPVLHDANMTVSSGECVVLHGHSGSGKSTLLRSLYAN CEEEEEEHHHHHHHEEECCCCCCCCEEECCCEEECCCCEEEEECCCCCCHHHHHHHHHHH YLPDSGHIWVNHQGEWLDMVQAEARQILAVRRHTLGWVSQFLRVIPRISALDVVMQPLLE HCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QGVNRAECRERAETLLNQLNVPQRLWQLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPT HCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCC ASLDSRNSAAVVALIEQAKQRGAAIVGIFHDEGVRQQVADRLYDMQAPQALEIL CCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHCCC >Mature Secondary Structure TIQIRVEHLSKTFVLHQQHGTQLPVLHDANMTVSSGECVVLHGHSGSGKSTLLRSLYAN EEEEEEHHHHHHHEEECCCCCCCCEEECCCEEECCCCEEEEECCCCCCHHHHHHHHHHH YLPDSGHIWVNHQGEWLDMVQAEARQILAVRRHTLGWVSQFLRVIPRISALDVVMQPLLE HCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QGVNRAECRERAETLLNQLNVPQRLWQLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPT HCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCC ASLDSRNSAAVVALIEQAKQRGAAIVGIFHDEGVRQQVADRLYDMQAPQALEIL CCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]