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The map label for this gene is yhbU [H]

Identifier: 157368751

GI number: 157368751

Start: 557826

End: 558821

Strand: Reverse

Name: yhbU [H]

Synonym: Spro_0504

Alternate gene names: 157368751

Gene position: 558821-557826 (Counterclockwise)

Preceding gene: 157368754

Following gene: 157368750

Centisome position: 10.26

GC content: 61.95

Gene sequence:

>996_bases
ATGGAGCTGCTTTGTCCCGCCGGTAATCTGCCGGCCCTGAAGGCTGCGGTAGATAACGGTGCCGACGCCGTGTATATCGG
CCTGAAAGATGATACCAACGCCCGCCACTTTGCCGGCCTCAACTTTACCGAGAAAAAGCTGCAGGAAGCGGTCGAGTATG
TGCATCGTCATAACCGCAAACTGCATATCGCCATCAATACCTTCGCCCACCCTGACGGCTATGTCCGCTGGCAGCGCGCG
GTAGATATGGCGGCGCAGTTGGGCGCCGATGTGCTGATCCTGGCCGATTTGGCGATGCTGGAATACGCCGCCGAACGTTA
CCCGCAGTTGGAGCGCCACGTCTCGGTGCAGGCGTCCGCCACCAACGAAGAAGCGATCCGTTTCTATCAGCGCCATTTTG
ATGTCAGCCGGGTAGTGTTGCCGCGCGTGTTGTCGATGCATCAGGTCAAGCAGTTGGCACGTACCAGCCCGGTGCCGCTG
GAGGTCTTCGCCTTCGGCAGCCTGTGCATCATGGCCGAGGGGCGCTGCTACCTTTCCTCTTATCTGACCGGCGAGTCTCC
CAATACCGTCGGGGCCTGCTCACCGGCGCGCTACGTGCGCTGGCAGCAAACGGCGCAGGGCATGGAGTCGCGCCTGAATG
GTGTGCTGATCGACCGTTATCGCGACGATGAAAATGCCGGCTACCCAACGCTGTGCAAGGGCCGCTATCTGGTCGATGAC
GTGCGCTATCACGCGCTGGAAGAACCCACCAGCCTCAATACGCTGGAACTGCTGCCGGAGCTGCTGGCTGCCAATATCGC
GTCGGTGAAGATTGAAGGCCGCCAGCGCAGCCCGGCCTACGTGAGCCAGGTGGCCCGCGTCTGGCGCCAGGCCATCGACC
GCTGCCAGGCCGACCCGGCCGCCTATCAGGCCGACGCCGGCTGGATGGAAGCCCTGGGTGCGATGTCAGAAGGCACTCAA
ACCACGCTCGGTGCTTATCACCGTAAATGGCAGTAG

Upstream 100 bases:

>100_bases
CAAATCAAAACCTGTTAAGTACGCTTTCACTAAAATTGCCTCCCGATTAGCGTTTGCCGGTGAAAGAGCCACCGGCAACC
CTTGGAGTCAGGATAAATCT

Downstream 100 bases:

>100_bases
CAGGAGGAAACATGAAATACGCATTAGGCCCGGTGCAGTATTATTGGCCGAAAACCGAGCTCGAAGAGTTCTATCGGCAG
GCGGTAAGCAGCAGCGCGGA

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MELLCPAGNLPALKAAVDNGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVEYVHRHNRKLHIAINTFAHPDGYVRWQRA
VDMAAQLGADVLILADLAMLEYAAERYPQLERHVSVQASATNEEAIRFYQRHFDVSRVVLPRVLSMHQVKQLARTSPVPL
EVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARYVRWQQTAQGMESRLNGVLIDRYRDDENAGYPTLCKGRYLVDD
VRYHALEEPTSLNTLELLPELLAANIASVKIEGRQRSPAYVSQVARVWRQAIDRCQADPAAYQADAGWMEALGAMSEGTQ
TTLGAYHRKWQ

Sequences:

>Translated_331_residues
MELLCPAGNLPALKAAVDNGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVEYVHRHNRKLHIAINTFAHPDGYVRWQRA
VDMAAQLGADVLILADLAMLEYAAERYPQLERHVSVQASATNEEAIRFYQRHFDVSRVVLPRVLSMHQVKQLARTSPVPL
EVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARYVRWQQTAQGMESRLNGVLIDRYRDDENAGYPTLCKGRYLVDD
VRYHALEEPTSLNTLELLPELLAANIASVKIEGRQRSPAYVSQVARVWRQAIDRCQADPAAYQADAGWMEALGAMSEGTQ
TTLGAYHRKWQ
>Mature_331_residues
MELLCPAGNLPALKAAVDNGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVEYVHRHNRKLHIAINTFAHPDGYVRWQRA
VDMAAQLGADVLILADLAMLEYAAERYPQLERHVSVQASATNEEAIRFYQRHFDVSRVVLPRVLSMHQVKQLARTSPVPL
EVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARYVRWQQTAQGMESRLNGVLIDRYRDDENAGYPTLCKGRYLVDD
VRYHALEEPTSLNTLELLPELLAANIASVKIEGRQRSPAYVSQVARVWRQAIDRCQADPAAYQADAGWMEALGAMSEGTQ
TTLGAYHRKWQ

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1789548, Length=331, Percent_Identity=88.2175226586103, Blast_Score=622, Evalue=1e-179,
Organism=Escherichia coli, GI1788397, Length=321, Percent_Identity=28.9719626168224, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI87081910, Length=293, Percent_Identity=31.3993174061433, Blast_Score=112, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 37025; Mature: 37025

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLCPAGNLPALKAAVDNGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVEYVHRHNRK
CCEECCCCCCCHHHHHHCCCCCEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHCCCE
LHIAINTFAHPDGYVRWQRAVDMAAQLGADVLILADLAMLEYAAERYPQLERHVSVQASA
EEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHEEEEECC
TNEEAIRFYQRHFDVSRVVLPRVLSMHQVKQLARTSPVPLEVFAFGSLCIMAEGRCYLSS
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCHHHHH
YLTGESPNTVGACSPARYVRWQQTAQGMESRLNGVLIDRYRDDENAGYPTLCKGRYLVDD
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEECCCHHHHH
VRYHALEEPTSLNTLELLPELLAANIASVKIEGRQRSPAYVSQVARVWRQAIDRCQADPA
HHHHHHCCCCCCCHHHHHHHHHHCCHHEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCC
AYQADAGWMEALGAMSEGTQTTLGAYHRKWQ
HHCCCCHHHHHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MELLCPAGNLPALKAAVDNGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVEYVHRHNRK
CCEECCCCCCCHHHHHHCCCCCEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHCCCE
LHIAINTFAHPDGYVRWQRAVDMAAQLGADVLILADLAMLEYAAERYPQLERHVSVQASA
EEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHEEEEECC
TNEEAIRFYQRHFDVSRVVLPRVLSMHQVKQLARTSPVPLEVFAFGSLCIMAEGRCYLSS
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCHHHHH
YLTGESPNTVGACSPARYVRWQQTAQGMESRLNGVLIDRYRDDENAGYPTLCKGRYLVDD
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEECCCHHHHH
VRYHALEEPTSLNTLELLPELLAANIASVKIEGRQRSPAYVSQVARVWRQAIDRCQADPA
HHHHHHCCCCCCCHHHHHHHHHHCCHHEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCC
AYQADAGWMEALGAMSEGTQTTLGAYHRKWQ
HHCCCCHHHHHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]