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The map label for this gene is yjiC [H]

Identifier: 157163770

GI number: 157163770

Start: 4560498

End: 4561328

Strand: Reverse

Name: yjiC [H]

Synonym: EcHS_A4552

Alternate gene names: 157163770

Gene position: 4561328-4560498 (Counterclockwise)

Preceding gene: 157163773

Following gene: 157163768

Centisome position: 98.23

GC content: 40.07

Gene sequence:

>831_bases
ATGTCTATGCCATTAAGCAATGCCCTTCAGAGTCAAATTATTACAGATAATCACTTCCTTCATCACCCAAAAGTCGACAA
TGAGTTAACACGTAAATATGAACGAGCTCGCCTGGATACGGAAAATATCTATCTTCTGCCTCTTGCTCGTGGCAATAACC
ATAATTACGATGGAAAAAGCGTTGTCGAAATTAGAAAACTTGATATTAGTAAAGAGTCCTGGCCATTTAATTATGTGACA
GAAGCATGCAGAGAATCCGATGGTATTACAACAACAGGACGTATGCTCTATCGAAACTTGAAAATCACCTCAGCTTTAGA
CGAAATATATGGTGGTATATGTAAAAAGGCGCATGCTGCTACAGAATTAGCAGAAGGTTTACGGCTAAATTTATTTATGA
AGAGCCCTTTCGATCCTGTTGAGGACTATACAGTTCATGAAATAACATTAGGCCCTGGTTGCAATGTTCCAGGTTACGCC
GGAACCACGATAGGATATATTTCAACCCTTCCAGTTTCTCAGGCAAAAAGATGGACCAATGAGCAGCCAAGAATTGATAT
CTATATTGATCAGATAATAACTGTCTCAGGGGTAGCAAATTCTTCCGGATTCGCCCTTGCCGCATTACTTAATGCTAATA
TTGGAATGGGAAATGACCCAATAATTGGTATAGAAGCCTATCCCGGTACCGCGGAGATCCATGCAAAAATGGGATATAAC
GTTATCCCCGGTGATGAAGATGCGCCACTCAAACGCATGACTCTGCAACCGTCATCTCTTCCAGAACTGTTTGAATTAAA
AAATGGTGAATGGAATTATATTGGTAAATAG

Upstream 100 bases:

>100_bases
AACAGAAACATGCATGTCATTTGTTTACTTCTCTTTTTACTACAGAAAAATTTATCTATTTTTCTAAACATCAGTGAAAT
ACTCCTAAAAGGTAACTATT

Downstream 100 bases:

>100_bases
CCACTGAGAAGAATGAGTACTAATATTCAGGTTATACAGATATTTAAACAATACCCTGCAATTTACAAAGTAATACTCAT
TGCGACTTCTTAATTTAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MSMPLSNALQSQIITDNHFLHHPKVDNELTRKYERARLDTENIYLLPLARGNNHNYDGKSVVEIRKLDISKESWPFNYVT
EACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHAATELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYA
GTTIGYISTLPVSQAKRWTNEQPRIDIYIDQIITVSGVANSSGFALAALLNANIGMGNDPIIGIEAYPGTAEIHAKMGYN
VIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK

Sequences:

>Translated_276_residues
MSMPLSNALQSQIITDNHFLHHPKVDNELTRKYERARLDTENIYLLPLARGNNHNYDGKSVVEIRKLDISKESWPFNYVT
EACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHAATELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYA
GTTIGYISTLPVSQAKRWTNEQPRIDIYIDQIITVSGVANSSGFALAALLNANIGMGNDPIIGIEAYPGTAEIHAKMGYN
VIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK
>Mature_275_residues
SMPLSNALQSQIITDNHFLHHPKVDNELTRKYERARLDTENIYLLPLARGNNHNYDGKSVVEIRKLDISKESWPFNYVTE
ACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHAATELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYAG
TTIGYISTLPVSQAKRWTNEQPRIDIYIDQIITVSGVANSSGFALAALLNANIGMGNDPIIGIEAYPGTAEIHAKMGYNV
IPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjfZ [H]

Homologues:

Organism=Escherichia coli, GI1790781, Length=276, Percent_Identity=92.3913043478261, Blast_Score=532, Evalue=1e-152,
Organism=Escherichia coli, GI1790648, Length=226, Percent_Identity=40.7079646017699, Blast_Score=172, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021220 [H]

Pfam domain/function: PF10887 DUF2686 [H]

EC number: NA

Molecular weight: Translated: 30631; Mature: 30500

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMPLSNALQSQIITDNHFLHHPKVDNELTRKYERARLDTENIYLLPLARGNNHNYDGKS
CCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCE
VVEIRKLDISKESWPFNYVTEACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHAA
EEEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYAGTTIGYISTLPVSQAKRWTN
HHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHEEEECCHHHHHHCCC
EQPRIDIYIDQIITVSGVANSSGFALAALLNANIGMGNDPIIGIEAYPGTAEIHAKMGYN
CCCEEEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCE
VIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK
ECCCCCCCCCEEEEECCCCCCHHHHCCCCCEECCCC
>Mature Secondary Structure 
SMPLSNALQSQIITDNHFLHHPKVDNELTRKYERARLDTENIYLLPLARGNNHNYDGKS
CCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCE
VVEIRKLDISKESWPFNYVTEACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHAA
EEEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYAGTTIGYISTLPVSQAKRWTN
HHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHEEEECCHHHHHHCCC
EQPRIDIYIDQIITVSGVANSSGFALAALLNANIGMGNDPIIGIEAYPGTAEIHAKMGYN
CCCEEEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCE
VIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK
ECCCCCCCCCEEEEECCCCCCHHHHCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]