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The map label for this gene is fimI

Identifier: 157163759

GI number: 157163759

Start: 4548736

End: 4549275

Strand: Direct

Name: fimI

Synonym: EcHS_A4541

Alternate gene names: 157163759

Gene position: 4548736-4549275 (Clockwise)

Preceding gene: 157163758

Following gene: 157163760

Centisome position: 97.96

GC content: 49.81

Gene sequence:

>540_bases
ATGAAAAGGAAGAGATTATTTCTATTAGCGTCGTTGCTGCCAATGTTTGCTCTGGCCGGAAATAAATGGAATACCACGCT
GCCCGGCGGAAATATGCAATTTCAGGGCGTCATTATTGCGGAAACTTGCCGGATTGAAGCCGGTGATAAACAAATGACGG
TCAATATGGGGCAAATCAGCAGTAACCGGTTTCATGCGGTAGGGGAAGATAGCGCACCGGTGCCTTTTGTTATTCATTTA
CGGGAATGTAGCACGGTGGTGAGTGAACGTGTGGGTGTGGCGTTTCACGGTGTCGCGGATGGTAAAAATCCGGATGTGCT
TTCCGTGGGAGAGGGGCCAGGGATAGCCACCAATATTGGCGTAGCGTTGTTTGATGATGAAGGAAACCTCGTACCGATTA
ATCGTCCTCCAGCAAACTGGAAACGGCTTTACTCAGGCTCTACTTCGCTACATTTCATCGCCAAATATCGTGCTACCGGG
CGTCGGGTTACTGGCGGCATCGCCAATGCCCAGGCCTGGTTCTCTTTAACCTATCAGTAA

Upstream 100 bases:

>100_bases
AATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACC
CTTGTGCGATAAAAATAACG

Downstream 100 bases:

>100_bases
TTGTTCAGCAGATAATGTGATAACAGGAACAGGACAGTGAGTAATAAAAACGTCAATGTAAGGAAATCGCAGGAAATAAC
ATTCTGCTTGCTGGCAGGTA

Product: type-1 fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAETCRIEAGDKQMTVNMGQISSNRFHAVGEDSAPVPFVIHL
RECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIATNIGVALFDDEGNLVPINRPPANWKRLYSGSTSLHFIAKYRATG
RRVTGGIANAQAWFSLTYQ

Sequences:

>Translated_179_residues
MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAETCRIEAGDKQMTVNMGQISSNRFHAVGEDSAPVPFVIHL
RECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIATNIGVALFDDEGNLVPINRPPANWKRLYSGSTSLHFIAKYRATG
RRVTGGIANAQAWFSLTYQ
>Mature_179_residues
MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAETCRIEAGDKQMTVNMGQISSNRFHAVGEDSAPVPFVIHL
RECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIATNIGVALFDDEGNLVPINRPPANWKRLYSGSTSLHFIAKYRATG
RRVTGGIANAQAWFSLTYQ

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family

Homologues:

Organism=Escherichia coli, GI87082421, Length=179, Percent_Identity=100, Blast_Score=372, Evalue=1e-105,
Organism=Escherichia coli, GI87081805, Length=174, Percent_Identity=31.6091954022989, Blast_Score=84, Evalue=5e-18,
Organism=Escherichia coli, GI1790773, Length=185, Percent_Identity=30.8108108108108, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI87081753, Length=164, Percent_Identity=31.7073170731707, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1790769, Length=156, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1787781, Length=151, Percent_Identity=29.1390728476821, Blast_Score=68, Evalue=3e-13,
Organism=Escherichia coli, GI87081804, Length=153, Percent_Identity=24.8366013071895, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FIMI_ECOLI (P39264)

Other databases:

- EMBL:   U14003
- EMBL:   U00096
- EMBL:   AP009048
- EMBL:   X00981
- RefSeq:   AP_004807.1
- RefSeq:   NP_418735.2
- ProteinModelPortal:   P39264
- SMR:   P39264
- DIP:   DIP-9617N
- MINT:   MINT-1256126
- STRING:   P39264
- EnsemblBacteria:   EBESCT00000002054
- EnsemblBacteria:   EBESCT00000014902
- GeneID:   948841
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5779
- KEGG:   eco:b4315
- EchoBASE:   EB1917
- EcoGene:   EG11974
- eggNOG:   COG3539
- GeneTree:   EBGT00050000008609
- HOGENOM:   HBG701898
- OMA:   VIIAEAC
- ProtClustDB:   CLSK880895
- BioCyc:   EcoCyc:EG11974-MONOMER
- Genevestigator:   P39264
- GO:   GO:0009289
- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779
- Gene3D:   G3DSA:2.60.40.1090

Pfam domain/function: PF00419 Fimbrial; SSF49401 Adhes_bact

EC number: NA

Molecular weight: Translated: 19373; Mature: 19373

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAETCRIEAGDKQMTVNMGQIS
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCEEEEEECCCC
SNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIATNIG
CCEEEEECCCCCCCCEEEEEHHHHHHHHHHCCEEEEECCCCCCCCEEEECCCCCEEEECE
VALFDDEGNLVPINRPPANWKRLYSGSTSLHFIAKYRATGRRVTGGIANAQAWFSLTYQ
EEEECCCCCEEECCCCCCCHHHHHCCCCCEEEEEEECCCCCEEECCCCCCEEEEEEEEC
>Mature Secondary Structure
MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAETCRIEAGDKQMTVNMGQIS
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCEEEEEECCCC
SNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIATNIG
CCEEEEECCCCCCCCEEEEEHHHHHHHHHHCCEEEEECCCCCCCCEEEECCCCCEEEECE
VALFDDEGNLVPINRPPANWKRLYSGSTSLHFIAKYRATGRRVTGGIANAQAWFSLTYQ
EEEECCCCCEEECCCCCCCHHHHHCCCCCEEEEEEECCCCCEEECCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 6147250