Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is arsR [H]
Identifier: 157162979
GI number: 157162979
Start: 3691039
End: 3691392
Strand: Direct
Name: arsR [H]
Synonym: EcHS_A3703
Alternate gene names: 157162979
Gene position: 3691039-3691392 (Clockwise)
Preceding gene: 157162976
Following gene: 157162980
Centisome position: 79.49
GC content: 50.28
Gene sequence:
>354_bases ATGTCATTTCTGTTACCCATCCAATTGTTCAAAATTCTTGCTGATGAAACCCGTCTGGGCATCGTTTTACTGCTCAGCGA ACTGGGAGAGTTATGCGTCTGCGATCTCTGCACTGCTCTCGACCAGTCGCAGCCCAAGATCTCCCGCCACCTGGCATTGC TGCGTGAAAGCGGGCTATTGCTGGACCGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGG GCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGATTCAGGCAATTGTCCGCAACCTGGCTCGACAAAA CTGTTCCGGGGACAGTAAGAACATTTGCAGTTAA
Upstream 100 bases:
>100_bases CTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCGAAGAGAGACACTACCT GCAACAATCAGGAGCGCAAT
Downstream 100 bases:
>100_bases AAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTC CTGACCATCGTATTGGTTAT
Product: DNA-binding transcriptional repressor ArsR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQPKISRHLALLRESGLLLDRKQGKWVHYRLSPHIPAW AAKIIDEAWRCEQEKIQAIVRNLARQNCSGDSKNICS
Sequences:
>Translated_117_residues MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQPKISRHLALLRESGLLLDRKQGKWVHYRLSPHIPAW AAKIIDEAWRCEQEKIQAIVRNLARQNCSGDSKNICS >Mature_116_residues SFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQPKISRHLALLRESGLLLDRKQGKWVHYRLSPHIPAWA AKIIDEAWRCEQEKIQAIVRNLARQNCSGDSKNICS
Specific function: Transcriptional repressor for the arsEFG operon. ArsE is a trans-acting regulatory protein which controls its own expression. The repressive effect of ArsE is alleviated by oxyions of +III oxidation state of arsenic, antimony, and bismuth, as well as arse
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789916, Length=117, Percent_Identity=99.1452991452991, Blast_Score=237, Evalue=2e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001845 - InterPro: IPR018334 - InterPro: IPR011991 [H]
Pfam domain/function: PF01022 HTH_5 [H]
EC number: NA
Molecular weight: Translated: 13267; Mature: 13136
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: PS00846 HTH_ARSR_1 ; PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQPKISRHLALLRESGLL CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCE LDRKQGKWVHYRLSPHIPAWAAKIIDEAWRCEQEKIQAIVRNLARQNCSGDSKNICS EECCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQPKISRHLALLRESGLL CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCE LDRKQGKWVHYRLSPHIPAWAAKIIDEAWRCEQEKIQAIVRNLARQNCSGDSKNICS EECCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7721697; 8041620; 9278503 [H]