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The map label for this gene is yraH [H]

Identifier: 157162627

GI number: 157162627

Start: 3338351

End: 3338935

Strand: Direct

Name: yraH [H]

Synonym: EcHS_A3334

Alternate gene names: 157162627

Gene position: 3338351-3338935 (Clockwise)

Preceding gene: 157162626

Following gene: 157162628

Centisome position: 71.89

GC content: 45.3

Gene sequence:

>585_bases
ATGAATAAAGGTACAAAAATAGCCATTGCGGGCTTACTTGCGCTTTTCGCAGGTAATGCCGCTGCAACAGATGGTGAAAT
AGTTTTTGATGGCGAGATTTTAAAATCCGCTTGTGAAATCAATGACTCTGATAAGAAAATTGAAGTTGCTCTTGGTCACT
ATAATGCCGAACAGTTTCGTTCTGTTGGCGATCGTAGCCCAAAAATTCCATTCACTATTCCTTTAGTTAACTGCCCAATG
ACTGGGTGGGAGCACGATAACGGCAACGTTGAAGCGTCTTTCCGTCTATGGCTAGAAACGCGGGATAATGGTACCGTTCC
TAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTGGGTATCCGTATTGACGATGCGG
AAAGCGGAAACATTATGCCACTGAATGCTATGGGCAATGATAACACGGTTTATCAGATCCCGGCGGACTCCAATGGTATT
GTCAATGTTGACCTCATCGCTTACTACGTATCAACCGTTGAAGCATCAGAAATCACCCCAGGGGAAGCAGACGCTGTCGT
TAACGTAACGCTGGATTACCGTTAA

Upstream 100 bases:

>100_bases
ATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTCACATTAAATATGATTATGTACTTG
TTACAAGGATAAGGTTATAT

Downstream 100 bases:

>100_bases
TACGTTACGGCGTTATCTGACCTGTCAGATAACGCCCTTTTCCTTCCTCTTTCTCGTTGTATCAGGTTGAAAAATGACTA
TGTCAAAACGAACATTCGCG

Product: putative type 1 fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MNKGTKIAIAGLLALFAGNAAATDGEIVFDGEILKSACEINDSDKKIEVALGHYNAEQFRSVGDRSPKIPFTIPLVNCPM
TGWEHDNGNVEASFRLWLETRDNGTVPNFPNLAKVGSFAGIAATGVGIRIDDAESGNIMPLNAMGNDNTVYQIPADSNGI
VNVDLIAYYVSTVEASEITPGEADAVVNVTLDYR

Sequences:

>Translated_194_residues
MNKGTKIAIAGLLALFAGNAAATDGEIVFDGEILKSACEINDSDKKIEVALGHYNAEQFRSVGDRSPKIPFTIPLVNCPM
TGWEHDNGNVEASFRLWLETRDNGTVPNFPNLAKVGSFAGIAATGVGIRIDDAESGNIMPLNAMGNDNTVYQIPADSNGI
VNVDLIAYYVSTVEASEITPGEADAVVNVTLDYR
>Mature_194_residues
MNKGTKIAIAGLLALFAGNAAATDGEIVFDGEILKSACEINDSDKKIEVALGHYNAEQFRSVGDRSPKIPFTIPLVNCPM
TGWEHDNGNVEASFRLWLETRDNGTVPNFPNLAKVGSFAGIAATGVGIRIDDAESGNIMPLNAMGNDNTVYQIPADSNGI
VNVDLIAYYVSTVEASEITPGEADAVVNVTLDYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1789531, Length=194, Percent_Identity=95.3608247422681, Blast_Score=379, Evalue=1e-107,
Organism=Escherichia coli, GI87082421, Length=200, Percent_Identity=28, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 20635; Mature: 20635

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKGTKIAIAGLLALFAGNAAATDGEIVFDGEILKSACEINDSDKKIEVALGHYNAEQFR
CCCCCEEHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHCCCCCCCEEEEEEECCCHHHHH
SVGDRSPKIPFTIPLVNCPMTGWEHDNGNVEASFRLWLETRDNGTVPNFPNLAKVGSFAG
HHCCCCCCCCEEEEEEECCCCCEECCCCCEEEEEEEEEEECCCCCCCCCCCHHHHCCCCC
IAATGVGIRIDDAESGNIMPLNAMGNDNTVYQIPADSNGIVNVDLIAYYVSTVEASEITP
EEECCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCEEEHHEEEEEEHHCCCCCCCC
GEADAVVNVTLDYR
CCCCEEEEEEEECC
>Mature Secondary Structure
MNKGTKIAIAGLLALFAGNAAATDGEIVFDGEILKSACEINDSDKKIEVALGHYNAEQFR
CCCCCEEHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHCCCCCCCEEEEEEECCCHHHHH
SVGDRSPKIPFTIPLVNCPMTGWEHDNGNVEASFRLWLETRDNGTVPNFPNLAKVGSFAG
HHCCCCCCCCEEEEEEECCCCCEECCCCCEEEEEEEEEEECCCCCCCCCCCHHHHCCCCC
IAATGVGIRIDDAESGNIMPLNAMGNDNTVYQIPADSNGIVNVDLIAYYVSTVEASEITP
EEECCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCEEEHHEEEEEEHHCCCCCCCC
GEADAVVNVTLDYR
CCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]