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The map label for this gene is yqhH

Identifier: 157162491

GI number: 157162491

Start: 3203458

End: 3203715

Strand: Direct

Name: yqhH

Synonym: EcHS_A3193

Alternate gene names: 157162491

Gene position: 3203458-3203715 (Clockwise)

Preceding gene: 157162490

Following gene: 157162501

Centisome position: 68.99

GC content: 48.45

Gene sequence:

>258_bases
ATGAAAACGATTTTCACCGTGGGAGCTGTTGTTCTGGCAACCTGCTTGCTCAGTGGCTGCGTCAATGAGCAAAAGGTCAA
TCAGCTGGCGAGCAATGTGCAAACATTAAATGCCAAAATCGCCCGGCTTGAGCAGGATATGAAAGCACTACGCCCACAAA
TCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTG
CGTATGTACGCAGAATGA

Upstream 100 bases:

>100_bases
GCCTACTTAAGCAGATTGAGGCAAAAACTGCCGCCAGATTAAAGCAATGAGCTGAATTAAATAACAATTAGCCGGAACAA
TAAATAAAAGGGAACACTAT

Downstream 100 bases:

>100_bases
TAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCAC
CAGCATTCACCGGACGAGAT

Product: putative outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKTIFTVGAVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLEQDMKALRPQIYAAKSEANRANTRLDAQDYFDCLRCL
RMYAE

Sequences:

>Translated_85_residues
MKTIFTVGAVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLEQDMKALRPQIYAAKSEANRANTRLDAQDYFDCLRCL
RMYAE
>Mature_85_residues
MKTIFTVGAVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLEQDMKALRPQIYAAKSEANRANTRLDAQDYFDCLRCL
RMYAE

Specific function: Unknown

COG id: COG4238

COG function: function code M; Murein lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789390, Length=85, Percent_Identity=100, Blast_Score=174, Evalue=1e-45,
Organism=Escherichia coli, GI1787967, Length=67, Percent_Identity=50.7462686567164, Blast_Score=74, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQHH_ECOLI (P65298)

Other databases:

- EMBL:   U28377
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   D65088
- RefSeq:   AP_003565.1
- RefSeq:   NP_417487.1
- ProteinModelPortal:   P65298
- SMR:   P65298
- STRING:   P65298
- EnsemblBacteria:   EBESCT00000003522
- EnsemblBacteria:   EBESCT00000017369
- GeneID:   946832
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW2982
- KEGG:   eco:b3014
- EchoBASE:   EB2837
- EcoGene:   EG13018
- eggNOG:   COG4238
- GeneTree:   EBGT00050000009858
- HOGENOM:   HBG739995
- OMA:   LANCAST
- ProtClustDB:   PRK09973
- BioCyc:   EcoCyc:G7567-MONOMER
- Genevestigator:   P65298
- InterPro:   IPR016367
- InterPro:   IPR023147
- Gene3D:   G3DSA:1.20.5.190
- PIRSF:   PIRSF002855

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9513; Mature: 9513

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIFTVGAVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLEQDMKALRPQIYAAKSE
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANRANTRLDAQDYFDCLRCLRMYAE
HHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTIFTVGAVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLEQDMKALRPQIYAAKSE
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANRANTRLDAQDYFDCLRCLRMYAE
HHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503