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The map label for this gene is ygfX

Identifier: 157162356

GI number: 157162356

Start: 3067929

End: 3068336

Strand: Reverse

Name: ygfX

Synonym: EcHS_A3055

Alternate gene names: 157162356

Gene position: 3068336-3067929 (Counterclockwise)

Preceding gene: 157162359

Following gene: 157162354

Centisome position: 66.08

GC content: 53.43

Gene sequence:

>408_bases
GTGGTCCTGTGGCAATCTGATTTGCGCGTCTCCTGGCGCGCACAGTGGCTTTCCTTGCTGATTCATGGGCTGGTTGCCGC
TGTTATTTTACTCATGCCCTGGCCACTCAGTTACACCCCGTTATGGATGGTGTTACTTTCGCTGGTGGTGTTTGATTGCG
TTCGCAGCCAGCGGCGTATTAATGCTCGCCAGGGGGAAATTCGCTTGTTGATGGACGGGCGTTTGCGTTGGCAAGGGCAG
GAGTGGAGCATCGTCAAAGCACCGTGGATGATTAAGAGCGGCATGATGCTGCGTTTACGTTCTGATGGCGGTAAACGGCA
ACATTTATGGCTGGCAGCCGACAGCATGGACGAAGCTGAATGGCGGGATTTACGGCGGATTTTGTTGCAACAAGAGACGC
AAAGATAA

Upstream 100 bases:

>100_bases
GACGATCCGGACCTGTTTAACTGGCTGATGAATCACGGTAAACCGGCCGATGCAGAACTGGAAATGATGGTCCGACTCAT
CCAGACACGGAACCGGGAAC

Downstream 100 bases:

>100_bases
AGATGACGGCAAAGCATATGCGCTAAGCCGTCAGTGAGATCAGGCGTAATGCTCTGCCATTTCGTTGAGGATTTGCTCGC
ACCAGCTCTGAATACGCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMVLLSLVVFDCVRSQRRINARQGEIRLLMDGRLRWQGQ
EWSIVKAPWMIKSGMMLRLRSDGGKRQHLWLAADSMDEAEWRDLRRILLQQETQR

Sequences:

>Translated_135_residues
MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMVLLSLVVFDCVRSQRRINARQGEIRLLMDGRLRWQGQ
EWSIVKAPWMIKSGMMLRLRSDGGKRQHLWLAADSMDEAEWRDLRRILLQQETQR
>Mature_135_residues
MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMVLLSLVVFDCVRSQRRINARQGEIRLLMDGRLRWQGQ
EWSIVKAPWMIKSGMMLRLRSDGGKRQHLWLAADSMDEAEWRDLRRILLQQETQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789263, Length=135, Percent_Identity=100, Blast_Score=263, Evalue=4e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YGFX_ECOLI (Q46824)

Other databases:

- EMBL:   U28375
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   H65073
- RefSeq:   AP_003455.1
- RefSeq:   NP_417372.1
- STRING:   Q46824
- EnsemblBacteria:   EBESCT00000002533
- EnsemblBacteria:   EBESCT00000014487
- GeneID:   947379
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW2864
- KEGG:   eco:b2896
- EchoBASE:   EB2884
- EcoGene:   EG13074
- eggNOG:   NOG06918
- GeneTree:   EBGT00050000011312
- HOGENOM:   HBG416979
- OMA:   CDLRVSW
- ProtClustDB:   CLSK880524
- BioCyc:   EcoCyc:G7509-MONOMER
- Genevestigator:   Q46824
- InterPro:   IPR009883
- PIRSF:   PIRSF020653
- ProDom:   PD083358

Pfam domain/function: PF07254 DUF1434

EC number: NA

Molecular weight: Translated: 16064; Mature: 16064

Theoretical pI: Translated: 11.52; Mature: 11.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x159ce988)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMVLLSLVVFDCVRSQRRI
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
NARQGEIRLLMDGRLRWQGQEWSIVKAPWMIKSGMMLRLRSDGGKRQHLWLAADSMDEAE
CCCCCCEEEEECCEEEECCCCCEEEECCEEECCCCEEEEECCCCCEEEEEEEECCCCHHH
WRDLRRILLQQETQR
HHHHHHHHHHHHCCH
>Mature Secondary Structure
MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMVLLSLVVFDCVRSQRRI
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
NARQGEIRLLMDGRLRWQGQEWSIVKAPWMIKSGMMLRLRSDGGKRQHLWLAADSMDEAE
CCCCCCEEEEECCEEEECCCCCEEEECCEEECCCCEEEEECCCCCEEEEEEEECCCCHHH
WRDLRRILLQQETQR
HHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503