Definition Escherichia coli HS, complete genome.
Accession NC_009800
Length 4,643,538

Click here to switch to the map view.

The map label for this gene is 157162322

Identifier: 157162322

GI number: 157162322

Start: 3023286

End: 3023384

Strand: Reverse

Name: 157162322

Synonym: EcHS_A3020

Alternate gene names: NA

Gene position: 3023384-3023286 (Counterclockwise)

Preceding gene: 157162323

Following gene: 157162321

Centisome position: 65.11

GC content: 39.39

Gene sequence:

>99_bases
TTGACTGAGCAAGATGAACGACAAGGACAACGACATCAGCCTTATGAGGAGCAAGAAAATGAAAGCAAATTCGAAAACGA
TCAGAAGGATGAAAGTTAA

Upstream 100 bases:

>100_bases
GAAAGCTTCAATGACTCTCATGTTGAAAGAGATGTCCAATCTTATCAATGATGAGGGAATTAAATAGTTTTCATAATGAG
TTACAGCACAACGTTGGGTA

Downstream 100 bases:

>100_bases
TGTTCGGTCTGAGGAAAGTAAATCGAAACACTCATACGTTTGAAACCACTTTTCAAAATTGGAAAGAAAATGGCGAAGAT
GTTGCATTATTAATGCCCGA

Product: type III secretion apparatus protein, truncation

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 32; Mature: 31

Protein sequence:

>32_residues
MTEQDERQGQRHQPYEEQENESKFENDQKDES

Sequences:

>Translated_32_residues
MTEQDERQGQRHQPYEEQENESKFENDQKDES
>Mature_31_residues
TEQDERQGQRHQPYEEQENESKFENDQKDES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3970; Mature: 3839

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQDERQGQRHQPYEEQENESKFENDQKDES
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
TEQDERQGQRHQPYEEQENESKFENDQKDES
CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA