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The map label for this gene is spaS [H]

Identifier: 157162317

GI number: 157162317

Start: 3019517

End: 3019879

Strand: Reverse

Name: spaS [H]

Synonym: EcHS_A3014

Alternate gene names: 157162317

Gene position: 3019879-3019517 (Counterclockwise)

Preceding gene: 157162318

Following gene: 157162314

Centisome position: 65.03

GC content: 35.54

Gene sequence:

>363_bases
ATGATTGCCAACCCTACTCACATTGCAATAGGGATATACTTTAAGCCACATCTTTCACCTATTCCATTGATTTCTGTAAG
AGAAACTAATGAGGTAGCCTTAGCCGTAAGGAAATATGCAAAGGAAATCGGAATACCAATTATCACAGATAAAAAATTAG
CACGAAAAATTTATGCTACCCATCGTCGCTACGATTATGTTAGCTTCGAAAATATAGATGAAATATTACGTCTTCTGCTG
TGGCTTGAAGATGTGGAGAATGCTGGACAACCTGTTCCAGATGAACAGCTCTCTTCAGAAGATAAATTCATTGAAGGTGA
AGAGAAAGAAATCGAGAATAAAGACGATAATTTAAAAAATTAA

Upstream 100 bases:

>100_bases
AGGAGCAAGAAGGAAATCCAGAAATTAAGTCTAAACGCAGAGAGCGCATCAGGAAATTCTTTCTGAGCAATTGAAGTCTG
ATGTCAGTAATAGTCGTTTG

Downstream 100 bases:

>100_bases
ACATCTGTCGTAGTCAGAAATTTATAAGAATCTACACGCAAAAACCGTGTAGATTCATTATTTAATGAGTTAAACGATCT
TATGAAATGACAAGCAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MIANPTHIAIGIYFKPHLSPIPLISVRETNEVALAVRKYAKEIGIPIITDKKLARKIYATHRRYDYVSFENIDEILRLLL
WLEDVENAGQPVPDEQLSSEDKFIEGEEKEIENKDDNLKN

Sequences:

>Translated_120_residues
MIANPTHIAIGIYFKPHLSPIPLISVRETNEVALAVRKYAKEIGIPIITDKKLARKIYATHRRYDYVSFENIDEILRLLL
WLEDVENAGQPVPDEQLSSEDKFIEGEEKEIENKDDNLKN
>Mature_120_residues
MIANPTHIAIGIYFKPHLSPIPLISVRETNEVALAVRKYAKEIGIPIITDKKLARKIYATHRRYDYVSFENIDEILRLLL
WLEDVENAGQPVPDEQLSSEDKFIEGEEKEIENKDDNLKN

Specific function: Involved in a secretory pathway responsible for the surface presentation of determinants needed for the entry of Salmonella species into mammalian cells [H]

COG id: COG1377

COG function: function code NU; Flagellar biosynthesis pathway, component FlhB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type III secretion exporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006135
- InterPro:   IPR006307 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 13860; Mature: 13860

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIANPTHIAIGIYFKPHLSPIPLISVRETNEVALAVRKYAKEIGIPIITDKKLARKIYAT
CCCCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHH
HRRYDYVSFENIDEILRLLLWLEDVENAGQPVPDEQLSSEDKFIEGEEKEIENKDDNLKN
HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MIANPTHIAIGIYFKPHLSPIPLISVRETNEVALAVRKYAKEIGIPIITDKKLARKIYAT
CCCCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHH
HRRYDYVSFENIDEILRLLLWLEDVENAGQPVPDEQLSSEDKFIEGEEKEIENKDDNLKN
HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8404849; 11677609 [H]