Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is eprJ
Identifier: 157162312
GI number: 157162312
Start: 3016616
End: 3016948
Strand: Reverse
Name: eprJ
Synonym: EcHS_A3009
Alternate gene names: NA
Gene position: 3016948-3016616 (Counterclockwise)
Preceding gene: 157162313
Following gene: 157162309
Centisome position: 64.97
GC content: 40.24
Gene sequence:
>333_bases ATGTCAGTAAGCAATATGCCACCTATTGATAGAGCTGAGCAATCAACTGCTCATGAAATACAGCAAGCGAAAGTGATTGA TTTAAATGACCGGGTTCTCAATCTTGACAACCCGGATGATAAAATGATCTCCGCTTTTGCCAACTATGCTGTACAAACTG AAAATTGGCAGCAAAATGCGTTACAAGCATTAAGGTCTGATAAAAAGGGGTTAACTCCTGAAAAATTATTAGTCTTGCAG GATCATGTGCTTAATTATAATGTCGAGGTTCCATTGGTGGGAACATTAGCAAGAAAGATTGTCGCTGCAGTTGAGACGTT GACCCGCTCATGA
Upstream 100 bases:
>100_bases ACATTATATCGAAATGCGCAATCTAACGTTGTAAAAGCGTATAAAGATCTTGATTCAGCAATCATACAAAACTTCCGCTA AACTGGATAAGGATTTTATT
Downstream 100 bases:
>100_bases AATATATATCATTATTATTGTTTATCCTGCTGTTGTGCGGCTGCAAGCAGCAGGAATTATTGAACCATCTTGATCAACAG CAAGCTAATGATGTCCTTGC
Product: type III secretion apparatus protein EprJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSVSNMPPIDRAEQSTAHEIQQAKVIDLNDRVLNLDNPDDKMISAFANYAVQTENWQQNALQALRSDKKGLTPEKLLVLQ DHVLNYNVEVPLVGTLARKIVAAVETLTRS
Sequences:
>Translated_110_residues MSVSNMPPIDRAEQSTAHEIQQAKVIDLNDRVLNLDNPDDKMISAFANYAVQTENWQQNALQALRSDKKGLTPEKLLVLQ DHVLNYNVEVPLVGTLARKIVAAVETLTRS >Mature_109_residues SVSNMPPIDRAEQSTAHEIQQAKVIDLNDRVLNLDNPDDKMISAFANYAVQTENWQQNALQALRSDKKGLTPEKLLVLQD HVLNYNVEVPLVGTLARKIVAAVETLTRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12281; Mature: 12150
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSNMPPIDRAEQSTAHEIQQAKVIDLNDRVLNLDNPDDKMISAFANYAVQTENWQQNA CCCCCCCCCCCHHHHHHHHHHHHHEECCCCCEECCCCCCHHHHHHHHHHHHCCCCHHHHH LQALRSDKKGLTPEKLLVLQDHVLNYNVEVPLVGTLARKIVAAVETLTRS HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVSNMPPIDRAEQSTAHEIQQAKVIDLNDRVLNLDNPDDKMISAFANYAVQTENWQQNA CCCCCCCCCCHHHHHHHHHHHHHEECCCCCEECCCCCCHHHHHHHHHHHHCCCCHHHHH LQALRSDKKGLTPEKLLVLQDHVLNYNVEVPLVGTLARKIVAAVETLTRS HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA