Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is elaB
Identifier: 157161753
GI number: 157161753
Start: 2421509
End: 2421814
Strand: Reverse
Name: elaB
Synonym: EcHS_A2412
Alternate gene names: 157161753
Gene position: 2421814-2421509 (Counterclockwise)
Preceding gene: 157161754
Following gene: 157161752
Centisome position: 52.15
GC content: 51.96
Gene sequence:
>306_bases ATGTCTAATCAGTTTGGTGATACACGTATCGATGACGACCTGACGCTGCTTAGTGAAACACTGGAAGAGGTGCTCCGCTC CTCTGGCGATCCCGCCGATCAGAAATATGTTGAGCTGAAAGCGCGTGCAGAAAAAGCGCTGGATGATGTGAAAAAACGGG TTAGCCAGGCTTCAGACAGTTATTACTATCGGGCGAAGCAGGCAGTTTATCGTGCTGATGACTACGTCCACGAAAAACCC TGGCAAGGAATTGGTGTGGGCGCGGCCGTTGGGCTGGTACTAGGACTGTTGCTGGCACGCCGTTAA
Upstream 100 bases:
>100_bases TGGTATCCCACACATTGGGATGGCACGCGAGGTAATTCAGGCGTAATCAACAACCCTTGTCTATATTTAGTGACAGGTTT TACGCAAATGGAGAACGAGA
Downstream 100 bases:
>100_bases AACCTCCCTACACCGGGGTACTGCATTTTTTTTGTAGTACCCCGTATAATGTGAGGCTTTTAACAGGGAGAGGTCCGCGT GCAATCACTTACTACGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MSNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKARAEKALDDVKKRVSQASDSYYYRAKQAVYRADDYVHEKP WQGIGVGAAVGLVLGLLLARR
Sequences:
>Translated_101_residues MSNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKARAEKALDDVKKRVSQASDSYYYRAKQAVYRADDYVHEKP WQGIGVGAAVGLVLGLLLARR >Mature_100_residues SNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKARAEKALDDVKKRVSQASDSYYYRAKQAVYRADDYVHEKPW QGIGVGAAVGLVLGLLLARR
Specific function: Unknown
COG id: COG4575
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ygaM and yqjD
Homologues:
Organism=Escherichia coli, GI1788601, Length=101, Percent_Identity=100, Blast_Score=202, Evalue=3e-54, Organism=Escherichia coli, GI1789485, Length=101, Percent_Identity=41.5841584158416, Blast_Score=91, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ELAB_ECO57 (P0AEH7)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: B91023 - PIR: C85867 - RefSeq: NP_288844.1 - RefSeq: NP_311181.1 - ProteinModelPortal: P0AEH7 - PRIDE: P0AEH7 - EnsemblBacteria: EBESCT00000025417 - EnsemblBacteria: EBESCT00000055489 - GeneID: 916862 - GeneID: 961187 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z3526 - KEGG: ecs:ECs3154 - GeneTree: EBGT00050000010837 - HOGENOM: HBG648388 - OMA: ADCADEF - ProtClustDB: PRK10404 - BioCyc: ECOL83334:ECS3154-MONOMER - InterPro: IPR010279
Pfam domain/function: PF05957 DUF883
EC number: NA
Molecular weight: Translated: 11306; Mature: 11175
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKARAEKALDDVKKRVSQASDS CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYYRAKQAVYRADDYVHEKPWQGIGVGAAVGLVLGLLLARR HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKARAEKALDDVKKRVSQASDS CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYYRAKQAVYRADDYVHEKPWQGIGVGAAVGLVLGLLLARR HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796