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The map label for this gene is ycgB

Identifier: 157160691

GI number: 157160691

Start: 1284148

End: 1285680

Strand: Reverse

Name: ycgB

Synonym: EcHS_A1291

Alternate gene names: 157160691

Gene position: 1285680-1284148 (Counterclockwise)

Preceding gene: 157160694

Following gene: 157160689

Centisome position: 27.69

GC content: 49.77

Gene sequence:

>1533_bases
ATGGCGACGATCGATTCTATGAATAAGGACACCACACGTTTGAGCGATGGACCCGACTGGACGTTCGACCTGCTGGATGT
TTATCTGGCAGAGATAGACCGGGTGGCGAAACTCTACCGGCTGGATACCTACCCGCACCAGATTGAAGTGATAACCTCAG
AACAGATGATGGATGCCTACTCCAGCGTCGGCATGCCAATTAACTATCCGCACTGGTCATTCGGTAAAAAGTTTATCGAG
ACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCT
GATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATGGCTCATGCCTGCTATGGGCATAACTCTTTCTTTAAAAACA
ATTACTTATTCCGTAGCTGGACCGACGCCAGTTCGATTGTCGATTATCTGATTTTTGCCCGTAAATATATTACCGAGTGC
GAAGAGCGTTATGGCGTTGATGAAGTAGAACGGCTTCTGGACTCGTGCCACGCGCTGATGAACTACGGCGTGGACCGGTA
CAAACGCCCGCAAAAAATCTCGCTGCAAGAAGAGAAAGCCCGGCAGAAAAGTCGCGAAGAGTATCTGCAAAGTCAGGTCA
ATATGCTCTGGCGTACCCTGCCGAAGCGCGAGGAAGAGAAAACGGTTGCTGAAGCGCGCCGCTATCCGTCCGAACCACAA
GAAAACCTGCTCTATTTTATGGAGAAAAATGCGCCACTGCTGGAATCATGGCAGCGTGAAATCCTGCGTATTGTGCGTAA
GGTGAGCCAGTATTTTTATCCGCAAAAACAGACTCAGGTGATGAACGAAGGCTGGGCGACCTTCTGGCACTACACCATCC
TTAACCATCTGTATGATGAAGGGAAAGTAACGGAACGTTTTATGCTGGAGTTTTTGCACAGCCACACCAATGTGGTCTTC
CAGCCCCCCTATAACAGCCCGTGGTACAGCGGCATCAACCCGTATGCCCTCGGGTTCGCCATGTTCCAGGATATTAAACG
GATTTGTCAGTCGCCAACGGAAGAAGACAAATACTGGTTCCCGGATATCGCCGGTTCCGACTGGCTGGAAACGCTGCATT
TCGCGATGCGTGATTTCAAAGATGAGAGTTTTATCAGCCAGTTCCTGTCACCGAAAGTGATGCGTGATTTCCGCTTCTTC
ACCGTGCTGGATGACGATCGGCATAATTATCTGGAGATTTCCGCTATTCATAATGAAGAAGGTTATCGGGAGATCCGTAA
CCGGTTATCGTCGCAATATAACTTAAGTAATCTGGAGCCGAATATTCAGATCTGGAACGTGGATTTGCGCGGCGACCGTT
CGCTGACGCTGCGTTATATTCCACATAATCGCGCACCGCTGGATCGGGGGCGCAAAGAAGTCCTGAAGCATGTGCATCGC
CTGTGGGGATTTGATGTGATGCTCGAACAGCAAAACGAAGACGGCAGCATCGAGTTGCTGGAACGTTGCCCGCCAAGAAT
GGGAAATCTGTAA

Upstream 100 bases:

>100_bases
CAAAGAAAAAAATTCTCCGGCGACGCGGTTTTTAACAGGTGTTCTATGCTTGAAATGAGGTGCTCCACACAGAGAGCGCC
GACAACAATGAGGTGCGCGT

Downstream 100 bases:

>100_bases
AAACAACAAAAAACCCCTCGTTTGAGGGGTTTGCTCTTTAAACGGAAGGGATTATCGCCCCTGAATGGCTAAATCACCCG
GCAGATTTTTCTGCATCCGG

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIE
TERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITEC
EERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYPSEPQ
ENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVF
QPPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFF
TVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHR
LWGFDVMLEQQNEDGSIELLERCPPRMGNL

Sequences:

>Translated_510_residues
MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIE
TERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITEC
EERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYPSEPQ
ENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVF
QPPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFF
TVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHR
LWGFDVMLEQQNEDGSIELLERCPPRMGNL
>Mature_509_residues
ATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIET
ERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITECE
ERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYPSEPQE
NLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQ
PPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFFT
VLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHRL
WGFDVMLEQQNEDGSIELLERCPPRMGNL

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR

Homologues:

Organism=Escherichia coli, GI1787437, Length=510, Percent_Identity=100, Blast_Score=1070, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCGB_ECOLI (P29013)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- EMBL:   L02948
- PIR:   A64865
- RefSeq:   AP_001813.1
- RefSeq:   NP_415706.1
- ProteinModelPortal:   P29013
- DIP:   DIP-11550N
- STRING:   P29013
- EnsemblBacteria:   EBESCT00000002600
- EnsemblBacteria:   EBESCT00000016749
- GeneID:   946365
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW1177
- KEGG:   eco:b1188
- EchoBASE:   EB1478
- EcoGene:   EG11516
- eggNOG:   COG2719
- GeneTree:   EBGT00050000011511
- HOGENOM:   HBG497724
- OMA:   AEPQENI
- ProtClustDB:   PRK11767
- BioCyc:   EcoCyc:EG11516-MONOMER
- Genevestigator:   P29013
- InterPro:   IPR007390

Pfam domain/function: PF04293 SpoVR

EC number: NA

Molecular weight: Translated: 60815; Mature: 60683

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAY
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHH
SSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVM
HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHH
AHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITECEERYGVDEVERLLDSCHALM
HHHHHCCCCHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYPSEPQ
HCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCH
ENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDE
HHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCC
GKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWF
CCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFFTVLDDDRHNYLEISAIHNEE
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHCEEEEEEECCCCCEEEEEEECCCH
GYREIRNRLSSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHR
HHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
LWGFDVMLEQQNEDGSIELLERCPPRMGNL
HHCCCEEEECCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
ATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHH
SSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVM
HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHH
AHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITECEERYGVDEVERLLDSCHALM
HHHHHCCCCHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYPSEPQ
HCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCH
ENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDE
HHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCC
GKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWF
CCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFFTVLDDDRHNYLEISAIHNEE
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHCEEEEEEECCCCCEEEEEEECCCH
GYREIRNRLSSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHR
HHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
LWGFDVMLEQQNEDGSIELLERCPPRMGNL
HHCCCEEEECCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689