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The map label for this gene is ymdE [H]

Identifier: 157160552

GI number: 157160552

Start: 1158563

End: 1158922

Strand: Direct

Name: ymdE [H]

Synonym: EcHS_A1147

Alternate gene names: 157160552

Gene position: 1158563-1158922 (Clockwise)

Preceding gene: 157160550

Following gene: 157160553

Centisome position: 24.95

GC content: 43.61

Gene sequence:

>360_bases
TTGCTGGGTAAGATCAGTGCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACT
GGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGTCGCTCCGTCAATTATCAAAGAAA
ATCTCTCATTACACTTAACTCATACGGTGAAATGGACTGAATCTCTCGATACATTTCTGAATATGCCAACCCCGGTAGCT
TTCCTTGAAATAAGTAATAAGCCCTATTTGGGGAATATGTTAAATGATTTTGCTGGCGTGGATCAGCAACGAGTTATGCA
TTGTCGTAAAGCATTTAGTGATGCAAAGGTATTCAAATGA

Upstream 100 bases:

>100_bases
AGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTC
ACTTAGCCGCGTGTCCACTA

Downstream 100 bases:

>100_bases
TTCCTGATTATTTAACTTTTATTCGCTTTCAGGATAAACGAAATCTGATATACATTTATGCTATTGGACTTATTCTGATA
GGCTTTTATTGGAAGAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MLGKISAWHTRLMEDGVQAMRDYLAGLDIASPEHQVLMNVTAKSEVAPSIIKENLSLHLTHTVKWTESLDTFLNMPTPVA
FLEISNKPYLGNMLNDFAGVDQQRVMHCRKAFSDAKVFK

Sequences:

>Translated_119_residues
MLGKISAWHTRLMEDGVQAMRDYLAGLDIASPEHQVLMNVTAKSEVAPSIIKENLSLHLTHTVKWTESLDTFLNMPTPVA
FLEISNKPYLGNMLNDFAGVDQQRVMHCRKAFSDAKVFK
>Mature_119_residues
MLGKISAWHTRLMEDGVQAMRDYLAGLDIASPEHQVLMNVTAKSEVAPSIIKENLSLHLTHTVKWTESLDTFLNMPTPVA
FLEISNKPYLGNMLNDFAGVDQQRVMHCRKAFSDAKVFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001227
- InterPro:   IPR016035 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13403; Mature: 13403

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGKISAWHTRLMEDGVQAMRDYLAGLDIASPEHQVLMNVTAKSEVAPSIIKENLSLHLT
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCHHHHHHHHHHCCCEEEEE
HTVKWTESLDTFLNMPTPVAFLEISNKPYLGNMLNDFAGVDQQRVMHCRKAFSDAKVFK
EEEHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLGKISAWHTRLMEDGVQAMRDYLAGLDIASPEHQVLMNVTAKSEVAPSIIKENLSLHLT
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCHHHHHHHHHHCCCEEEEE
HTVKWTESLDTFLNMPTPVAFLEISNKPYLGNMLNDFAGVDQQRVMHCRKAFSDAKVFK
EEEHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]