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The map label for this gene is ycbC

Identifier: 157160441

GI number: 157160441

Start: 1032960

End: 1033739

Strand: Reverse

Name: ycbC

Synonym: EcHS_A1027

Alternate gene names: 157160441

Gene position: 1033739-1032960 (Counterclockwise)

Preceding gene: 157160449

Following gene: 157160427

Centisome position: 22.26

GC content: 52.18

Gene sequence:

>780_bases
ATGCTTTTTACACTGAAAAAAGTGATTGGCAATATGTTGCTGCCACTTCCGCTGATGTTGTTGATTATTGGCGCTGGCCT
GGCGCTGCTGTGGTTTAGCCGTTTTCAAAAAACCGGGAAGATTTTTATTAGCATTGGGTGGCTGGCGCTCTTGTTATTGA
GTTTGCAACCGGTAGCCGACCGCCTGCTGCGTCCCATCGAAAGCACCTATCCGACATGGAATAATTCGCAAAAAGTGGAC
TATATCGTGGTGCTCGGAGGTGGTTATACCTGGAACCCGCAGTGGGCACCGAGCTCTAATTTAATCAATAACAGTCTGCC
ACGCCTGAATGAAGGTATTCGCTTATGGCGCGAAAATCCGGGATCAAAACTGATCTTCACGGGAGGCGTAGCAAAAACCA
ATACGGTGAGTACAGCGGAAGTAGGTGCCAGAGTTGCGCAATCGCTGGGCGTGCCGCGCGAGCAAATTATCACCCTGGAT
TTGCCAAAAGATACCGAAGAAGAAGCTGCAGCAGTGAAACAGGCGATTGGTGACGCCCCTTTCCTGCTGGTGACCTCCGC
ATCACATCTGCCGCGGGCGATGATCTTTTTTCAGCAGGAAGGGTTAAATCCGCTACCAGCCCCGGCGAATCAGTTGGCCA
TCGACTCGCCGCTTAACCCGTGGGAACGGGCAATCCCTTCTCCGGTCTGGTTGATGCATAGCGATCGTGTTGGCTATGAA
ACGCTTGGCCGTATCTGGCAGTGGCTAAAAGGTTCGTCAGGCGAGCCACGGCAAGAGTGA

Upstream 100 bases:

>100_bases
TAAAGACGCTATTTTGTCACAGCCACGGCGAGAATGAACCCGTCTGGTGTAATATCGCTGGCGATCCCTTGCTATATGGT
TAAAAAAGGAACCAGAAAGG

Downstream 100 bases:

>100_bases
TTTTGATGCCAGATCGAAGTTGCGCCGACTAAATCGTCCGGTATTAACCAGTTGCGCAACTTCATCCCATAACACATACA
ACCAACGCCGCCAGATGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTGKIFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVD
YIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLD
LPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYE
TLGRIWQWLKGSSGEPRQE

Sequences:

>Translated_259_residues
MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTGKIFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVD
YIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLD
LPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYE
TLGRIWQWLKGSSGEPRQE
>Mature_259_residues
MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTGKIFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVD
YIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLD
LPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYE
TLGRIWQWLKGSSGEPRQE

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=259, Percent_Identity=100, Blast_Score=517, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCBC_ECO57 (P0AB02)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   A85618
- PIR:   C90754
- RefSeq:   NP_286795.1
- RefSeq:   NP_309030.1
- ProteinModelPortal:   P0AB02
- PRIDE:   P0AB02
- EnsemblBacteria:   EBESCT00000028794
- EnsemblBacteria:   EBESCT00000055637
- GeneID:   917746
- GeneID:   958886
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z1267
- KEGG:   ecs:ECs1003
- GeneTree:   EBGT00050000010629
- HOGENOM:   HBG725395
- OMA:   QRAIHEY
- ProtClustDB:   PRK10494
- BioCyc:   ECOL83334:ECS1003-MONOMER
- InterPro:   IPR003848
- InterPro:   IPR014729
- Gene3D:   G3DSA:3.40.50.620

Pfam domain/function: PF02698 DUF218

EC number: NA

Molecular weight: Translated: 28667; Mature: 28667

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTGKIFISIGWLALLLLSLQPVAD
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCHHHH
RLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENP
HHHHHHHHCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCHHHCCCHHHHHHHHHHHCCC
GSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIGDAP
CCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHEEEEECCCCCHHHHHHHHHHHCCCC
FLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYE
EEEEECCCCCCHHHEEEHHCCCCCCCCCCCCEEECCCCCHHHHHCCCCEEEEECCCCCHH
TLGRIWQWLKGSSGEPRQE
HHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTGKIFISIGWLALLLLSLQPVAD
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCHHHH
RLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENP
HHHHHHHHCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCHHHCCCHHHHHHHHHHHCCC
GSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIGDAP
CCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHEEEEECCCCCHHHHHHHHHHHCCCC
FLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYE
EEEEECCCCCCHHHEEEHHCCCCCCCCCCCCEEECCCCCHHHHHCCCCEEEEECCCCCHH
TLGRIWQWLKGSSGEPRQE
HHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796