Click here to switch to the map view.

The map label for this gene is ycaO

Identifier: 157160427

GI number: 157160427

Start: 1015215

End: 1016975

Strand: Reverse

Name: ycaO

Synonym: EcHS_A1011

Alternate gene names: 157160427

Gene position: 1016975-1015215 (Counterclockwise)

Preceding gene: 157160441

Following gene: 157160426

Centisome position: 21.9

GC content: 51.56

Gene sequence:

>1761_bases
ATGACGCAAACATTTATCCCCGGCAAAGATGCCGCTCTGGAAGATTCCATCGCTCGCTTCCAGCAAAAACTTTCAGACCT
CGGCTTTCAGATTGAAGAGGCCTCCTGGCTGAATCCCGTGCCTAACGTCTGGTCTGTACATATTCGCGACAAAGAGTGCG
CACTGTGTTTTACCAACGGTAAAGGCGCAACCAAGAAAGCGGCGCTGGCTTCTGCACTCGGTGAATATTTCGAGCGTCTC
TCAACCAACTACTTTTTTGCGGACTTCTGGCTGGGCGAAACCATCGCCAACGGTCCGTTCGTGCATTATCCCAACGAAAA
ATGGTTCCCACTGACCGAAAATGACGATGTGCCAGAAGGGCTGCTCGATGACCGTCTGCGCGCGTTTTATGATCCGGAGA
ATGAACTGACCGGCAGCATGCTGATTGACCTACAATCCGGTAACGAAGATCGTGGTATTTGCGGCCTGCCGTTTACGCGT
CAGTCCGACAATCAGACCGTTTATATTCCGATGAATATCATTGGTAACCTGTACGTCTCCAACGGTATGTCCGCAGGTAA
TACCCGCAACGAAGCACGCGTTCAGGGATTGTCTGAAGTTTTCGAACGCTACGTGAAAAACCGCATTATTGCTGAAAGCA
TCAGCCTGCCAGAGATCCCGGCAGACGTGCTGGCGCGTTACCCAGCAGTAGTTGAAGCCATCGAAACGCTGGAAGCGGAG
GGTTTCCCAATCTTCGCTTATGACGGTTCGCTTGGCGGCCAGTATCCGGTGATTTGCGTGGTACTGTTCAATCCTGCTAA
CGGTACCTGCTTTGCCTCTTTCGGTGCGCATCCTGATTTTGGCGTAGCACTGGAACGTACCGTGACCGAGCTGCTGCAAG
GTCGTGGCCTGAAAGATTTGGATGTGTTTACTCCGCCAACCTTCGATGATGAAGAAGTCGCTGAACATACCAACCTCGAA
ACGCACTTTATCGATTCCAGCGGTTTAATCTCCTGGGACCTGTTCAAGCAGGATGCCGATTATCCGTTTGTGGACTGGAA
TTTCTCCGGCACCACGGAAGAAGAGTTCGCCACACTGATGGCTATCTTCAACAAAGAAGATAAAGAAGTTTATATTGCCG
ATTACGAGCATCTGGGCGTTTATGCTTGCCGTATTATCGTGCCTGGCATGTCCGATATTTATCCGGCTGAAGATCTGTGG
CTCGCGAATAACAGTATGGGCAGCCATTTACGTGAAACGATTCTTTCGCTACCAGGCAGCGAGTGGGAAAAAGAAGATTA
CCTGAACCTCATCGAGCAACTGGATGAAGAAGGTTTTGATGACTTTACCCGCGTGCGTGAGCTGTTGGGTCTGGCGACCG
GGTCGGATAACGGTTGGTACACCCTGCGTATCGGTGAATTAAAAGCCATGCTGGCGCTGGCTGGTGGCGATCTGGAACAG
GCTCTGGTCTGGACCGAATGGACGATGGAGTTTAACTCATCAGTATTTAGTCCGGAACGCGCCAACTATTATCGCTGCCT
GCAAACGTTGTTATTACTGGCACAGGAAGAAGATCGCCAGCCGCTGCAATATCTGAATGCGTTTGTTCGCATGTACGGCG
CAGATGCCGTAGAAGCCGCCAGTGCGGCAATGAGCGGCGAAGCGGCGTTTTACGGCCTGCAACCGGTAGATAGCGATCTG
CACGCGTTTGCTGCACATCAGTCGTTGTTGAAGGCCTACGAAAAGCTGCAGCGCGCCAAAGCAGCATTCTGGGCAAAATA
A

Upstream 100 bases:

>100_bases
AAAAGCATAGTCAACAGTTCATCGGCATGGCGGCGGTGATAGCGCCTTTGAGATAAAACCCGTATTATTGCGCGCTTTCC
GTACGACTAAAGTGATTTTC

Downstream 100 bases:

>100_bases
AATCAAATAGCCTACGCAATGTAGGCTTAATGATTAGTCTGAGTTATATTACGGGGCGTTTTTTTAATGCCCCGCTTTAC
ATATATTTGCATTAATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 586; Mature: 585

Protein sequence:

>586_residues
MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERL
STNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTR
QSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE
GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLE
THFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLW
LANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQ
ALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDL
HAFAAHQSLLKAYEKLQRAKAAFWAK

Sequences:

>Translated_586_residues
MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERL
STNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTR
QSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE
GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLE
THFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLW
LANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQ
ALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDL
HAFAAHQSLLKAYEKLQRAKAAFWAK
>Mature_585_residues
TQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERLS
TNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQ
SDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAEG
FPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLET
HFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWL
ANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQA
LVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLH
AFAAHQSLLKAYEKLQRAKAAFWAK

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family

Homologues:

Organism=Escherichia coli, GI87081799, Length=586, Percent_Identity=100, Blast_Score=1211, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCAO_ECOLI (P75838)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   H64829
- RefSeq:   AP_001535.1
- RefSeq:   NP_415425.4
- ProteinModelPortal:   P75838
- DIP:   DIP-11470N
- MINT:   MINT-1240855
- STRING:   P75838
- EnsemblBacteria:   EBESCT00000001268
- EnsemblBacteria:   EBESCT00000015197
- GeneID:   945509
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW0888
- KEGG:   eco:b0905
- EchoBASE:   EB3463
- EcoGene:   EG13699
- eggNOG:   COG1944
- GeneTree:   EBGT00050000011131
- HOGENOM:   HBG296881
- OMA:   ENTVWGQ
- ProtClustDB:   CLSK866891
- BioCyc:   EcoCyc:G6468-MONOMER
- Genevestigator:   P75838
- InterPro:   IPR003776
- TIGRFAMs:   TIGR00702

Pfam domain/function: PF02624 YcaO

EC number: NA

Molecular weight: Translated: 65652; Mature: 65521

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNG
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCEEEEEECC
KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEG
CCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHCHHHCCCCEEECCCCCCCCCCCCCCCCCH
LLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVS
HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCEEEEEHHHHCCCCEE
NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
CCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCC
DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLM
CCCCCCCCCHHHHHHHCCCCEEEECCCCCEEEEHHHCCCCCCEEECCCCCCCHHHHHHHH
AIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGS
HHHCCCCCEEEEEECHHCCEEEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCC
EWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQ
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCHHH
ALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAA
EEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHH
SAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK
HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNG
CCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCEEEEEECC
KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEG
CCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHCHHHCCCCEEECCCCCCCCCCCCCCCCCH
LLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVS
HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCEEEEEHHHHCCCCEE
NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
CCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCC
DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLM
CCCCCCCCCHHHHHHHCCCCEEEECCCCCEEEEHHHCCCCCCEEECCCCCCCHHHHHHHH
AIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGS
HHHCCCCCEEEEEECHHCCEEEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCC
EWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQ
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCHHH
ALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAA
EEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHH
SAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK
HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503