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The map label for this gene is ybiP

Identifier: 157160293

GI number: 157160293

Start: 877617

End: 879200

Strand: Reverse

Name: ybiP

Synonym: EcHS_A0872

Alternate gene names: 157160293

Gene position: 879200-877617 (Counterclockwise)

Preceding gene: 157160294

Following gene: 157160291

Centisome position: 18.93

GC content: 48.36

Gene sequence:

>1584_bases
ATGAATTTAACCCTCAAAGAATCGCTTGTTACCCGTAGCCGGGTATTTAGCCCGTGGACTGCGTTCTACTTTTTACAGTC
GCTATTAATTAACCTCGGCTTAGGTTACCCCTTCAGTTTGCTCTACACCGCTGCGTTTACGGCTATTTTGCTTTTGCTAT
GGCGAACATTGCCTCGCGTACAAAAAGTTCTGGTCGGTGTCAGTTCGCTGGTGGCGGCTTGTTATTTCCCTTTTGCTCAG
GCCTACGGCGCGCCTAATTTCAATACATTGCTGGCATTGCACTCCACCAATATGGAAGAGTCGACCGAAATCCTGACGAT
TTTTCCGTGGTACAGCTACCTGGTCGGCTTATTTATTTTTGCGCTCGGCGTAATAGCAATCAGGCGAAAAAAAGAGAATG
AAAAAGCGCGCTGGAATACCTTCGACAGCCTGTGTCTGGTATTCAGTGTGGCGACATTTTTTGTTGCTCCCGTGCAAAAC
CTGGCCTGGGGTGGCGTATTTAAACTGAAAGATACTGGCTATCCGGTATTTCGTTTTGCTAAGGATGTCATCGTCAATAA
TAACGAGGTGATTGAAGAGCAAGAACGGATGGCAAAACTTTCCGGAATGAAAGATACCTGGACGGTCACTGCCGTTAAGC
CGAAGTATCAGACCTATGTGGTGGTGATCGGTGAAAGCGCGCGTCGCGATGCCCTCGGTGCCTTTGGCGGTCACTGGGAC
AATACCCCGTTTGCCAGCAGCGTTAACGGTTTGATATTTGCTGACTACATTGCCGCCAGTGGCTCCACGCAGAAATCGCT
TGGCTTAACGCTCAATCGCGTTGTCGATGGCAAACCACAGTTTCAGGATAACTTTGTCACCCTGGCAAATCGCGCGGGCT
TCCAGACCTGGTGGTTTTCCAACCAGGGTCAAATCGGCGAATACGATACCGCTATCGCCAGCATCGCCAAACGAGCAGAT
GAAGTGTACTTCCTGAAAGAAGGTAATTTTGAAGCAGATAAAAACACCAAAGACGAAGCGTTACTGGATATGACCGCTCA
AGTGCTGGCGCAAGAGCACTCGCAACCGCAGCTGATTGTTCTACATCTGATGGGCTCACATCCGCAGGCCTGCGACAGGA
CACAAGGAAAATACGAAACCTTTGTGCAATCGAAAGAAACGTCGTGCTATCTCTATACCATGACGCAAACGGACGATTTA
CTGCGCAAGCTGTACGATCAGTTACGCAACAGCGGCAGCAGCTTCTCGCTGGTTTACTTTTCTGACCACGGTCTGGCCTT
TAAAGAGCGCGGTAAAGACGTGCAATACCTTGCCCATGATGATAAATATCAGCAAAATTTCCAGGTGCCTTTTATGGTCA
TTTCCAGCGACGATAAAGCGCATCGTGTGATTAAAGCCCGCCGCTCAGCCAATGACTTCTTAGGCTTTTTCTCCCAGTGG
ACGGGGATTAAAGCGAAGGAAATTAACATCAAATACCCGTTTATATCTGAGAAGAAAGCCGGGCCGATATACATCACCAA
CTTCCAGTTACAGAAGGTGGATTACAACCATCTCGGAACCGATATTTTCGACCCGAAACCTTAA

Upstream 100 bases:

>100_bases
GGCTCGCGGATGCGGACCCCTTTCCACTCTTCACGCACTCTTGCAGGTATTGACCCTTGACGCCAGGGTAAGCACATGGC
GTTTGTTACGATAGTGGCAT

Downstream 100 bases:

>100_bases
AAACAAAAATCCGCCCCGAGAGGCGGATTTTTTATATCACCAAAGTGATTAGAAGCGGTAACCAACACCGGCAATCCAGG
TGCCTACGTCAACGCTACGA

Product: sulfatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTAAFTAILLLLWRTLPRVQKVLVGVSSLVAACYFPFAQ
AYGAPNFNTLLALHSTNMEESTEILTIFPWYSYLVGLFIFALGVIAIRRKKENEKARWNTFDSLCLVFSVATFFVAPVQN
LAWGGVFKLKDTGYPVFRFAKDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQTYVVVIGESARRDALGAFGGHWD
NTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVDGKPQFQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRAD
EVYFLKEGNFEADKNTKDEALLDMTAQVLAQEHSQPQLIVLHLMGSHPQACDRTQGKYETFVQSKETSCYLYTMTQTDDL
LRKLYDQLRNSGSSFSLVYFSDHGLAFKERGKDVQYLAHDDKYQQNFQVPFMVISSDDKAHRVIKARRSANDFLGFFSQW
TGIKAKEINIKYPFISEKKAGPIYITNFQLQKVDYNHLGTDIFDPKP

Sequences:

>Translated_527_residues
MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTAAFTAILLLLWRTLPRVQKVLVGVSSLVAACYFPFAQ
AYGAPNFNTLLALHSTNMEESTEILTIFPWYSYLVGLFIFALGVIAIRRKKENEKARWNTFDSLCLVFSVATFFVAPVQN
LAWGGVFKLKDTGYPVFRFAKDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQTYVVVIGESARRDALGAFGGHWD
NTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVDGKPQFQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRAD
EVYFLKEGNFEADKNTKDEALLDMTAQVLAQEHSQPQLIVLHLMGSHPQACDRTQGKYETFVQSKETSCYLYTMTQTDDL
LRKLYDQLRNSGSSFSLVYFSDHGLAFKERGKDVQYLAHDDKYQQNFQVPFMVISSDDKAHRVIKARRSANDFLGFFSQW
TGIKAKEINIKYPFISEKKAGPIYITNFQLQKVDYNHLGTDIFDPKP
>Mature_527_residues
MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTAAFTAILLLLWRTLPRVQKVLVGVSSLVAACYFPFAQ
AYGAPNFNTLLALHSTNMEESTEILTIFPWYSYLVGLFIFALGVIAIRRKKENEKARWNTFDSLCLVFSVATFFVAPVQN
LAWGGVFKLKDTGYPVFRFAKDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQTYVVVIGESARRDALGAFGGHWD
NTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVDGKPQFQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRAD
EVYFLKEGNFEADKNTKDEALLDMTAQVLAQEHSQPQLIVLHLMGSHPQACDRTQGKYETFVQSKETSCYLYTMTQTDDL
LRKLYDQLRNSGSSFSLVYFSDHGLAFKERGKDVQYLAHDDKYQQNFQVPFMVISSDDKAHRVIKARRSANDFLGFFSQW
TGIKAKEINIKYPFISEKKAGPIYITNFQLQKVDYNHLGTDIFDPKP

Specific function: Unknown

COG id: COG2194

COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoethanolamine transferase family

Homologues:

Organism=Escherichia coli, GI1787035, Length=527, Percent_Identity=100, Blast_Score=1094, Evalue=0.0,
Organism=Escherichia coli, GI87082223, Length=268, Percent_Identity=30.2238805970149, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1790392, Length=503, Percent_Identity=21.272365805169, Blast_Score=77, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBIP_ECOLI (P75785)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   G64818
- RefSeq:   AP_001446.1
- RefSeq:   NP_415336.1
- ProteinModelPortal:   P75785
- STRING:   P75785
- EnsemblBacteria:   EBESCT00000000447
- EnsemblBacteria:   EBESCT00000014675
- GeneID:   945360
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW0800
- KEGG:   eco:b0815
- EchoBASE:   EB3105
- EcoGene:   EG13321
- GeneTree:   EBGT00050000009020
- HOGENOM:   HBG644083
- OMA:   DKNTRDE
- ProtClustDB:   CLSK879772
- BioCyc:   EcoCyc:G6418-MONOMER
- Genevestigator:   P75785
- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917
- Gene3D:   G3DSA:3.40.720.10

Pfam domain/function: PF00884 Sulfatase; SSF53649 Alkaline_phosphatase_core

EC number: NA

Molecular weight: Translated: 59707; Mature: 59707

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x127f04ec)-; HASH(0x12bc2fa4)-; HASH(0x1375f40c)-; HASH(0x13858f8c)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTAAFTAILLLLWRTLPRV
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QKVLVGVSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEESTEILTIFPWYSYLVGLFIF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECHHHHHHHHHHH
ALGVIAIRRKKENEKARWNTFDSLCLVFSVATFFVAPVQNLAWGGVFKLKDTGYPVFRFA
HHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHH
KDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQTYVVVIGESARRDALGAFGGHWD
HHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHCCCCCCC
NTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVDGKPQFQDNFVTLANRAGFQTWWFS
CCCCCCCCCCEEEEEEHHCCCCCCHHHCCEEEHHCCCCCCCCCCEEEEECCCCCEEEEEC
NQGQIGEYDTAIASIAKRADEVYFLKEGNFEADKNTKDEALLDMTAQVLAQEHSQPQLIV
CCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE
LHLMGSHPQACDRTQGKYETFVQSKETSCYLYTMTQTDDLLRKLYDQLRNSGSSFSLVYF
EEEECCCCCHHHCCCCHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEE
SDHGLAFKERGKDVQYLAHDDKYQQNFQVPFMVISSDDKAHRVIKARRSANDFLGFFSQW
ECCCCCHHHCCCCEEEEECCCHHCCCCCCCEEEEECCCHHHHHHHHHHCHHHHHHHHHHH
TGIKAKEINIKYPFISEKKAGPIYITNFQLQKVDYNHLGTDIFDPKP
CCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEECHHHCCCCCCCCCH
>Mature Secondary Structure
MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTAAFTAILLLLWRTLPRV
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QKVLVGVSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEESTEILTIFPWYSYLVGLFIF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECHHHHHHHHHHH
ALGVIAIRRKKENEKARWNTFDSLCLVFSVATFFVAPVQNLAWGGVFKLKDTGYPVFRFA
HHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHH
KDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQTYVVVIGESARRDALGAFGGHWD
HHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHCCCCCCC
NTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVDGKPQFQDNFVTLANRAGFQTWWFS
CCCCCCCCCCEEEEEEHHCCCCCCHHHCCEEEHHCCCCCCCCCCEEEEECCCCCEEEEEC
NQGQIGEYDTAIASIAKRADEVYFLKEGNFEADKNTKDEALLDMTAQVLAQEHSQPQLIV
CCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE
LHLMGSHPQACDRTQGKYETFVQSKETSCYLYTMTQTDDLLRKLYDQLRNSGSSFSLVYF
EEEECCCCCHHHCCCCHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEE
SDHGLAFKERGKDVQYLAHDDKYQQNFQVPFMVISSDDKAHRVIKARRSANDFLGFFSQW
ECCCCCHHHCCCCEEEEECCCHHCCCCCCCEEEEECCCHHHHHHHHHHCHHHHHHHHHHH
TGIKAKEINIKYPFISEKKAGPIYITNFQLQKVDYNHLGTDIFDPKP
CCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEECHHHCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503