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The map label for this gene is ybiI

Identifier: 157160279

GI number: 157160279

Start: 864794

End: 865060

Strand: Reverse

Name: ybiI

Synonym: EcHS_A0858

Alternate gene names: 157160279

Gene position: 865060-864794 (Counterclockwise)

Preceding gene: 157160280

Following gene: 157160278

Centisome position: 18.63

GC content: 51.69

Gene sequence:

>267_bases
ATGGCATCCGGTTGGGCTAACGATGACGCCGTCAACGAACAGATCAACAGTACAATTGAAGATGCGATTGCCCGTGCTCG
GGGTGAAATTCCGCGCGGCGAAAGCCTGGATGAATGTGAAGAGTGCGGTGCCCCCATCCCGCAGGCCCGTCGGGAAGCCA
TTCCTGGCGTGCGCTTATGTATTCATTGTCAGCAGGAGAAAGATTTACAAAAACCAGCTTATACAGGATATAATCGCAGA
GGTTCGAAAGACAGCCAGTTACGTTAA

Upstream 100 bases:

>100_bases
CTGCTGCGGGAATGGTCGGAGATCTGATGCTTGAACTGCCCGAGTTCGTCCCTGGATTAGCTACACTTAACTGTACAAGT
ATTGATATGGGGAGGTCGAT

Downstream 100 bases:

>100_bases
CTACAACTGGCGAGATGCATAGCGAGTATAATTTGTATTTTGCGTGGCATTCCGTGCCTTTAACGCTGCTGTGACTGCCA
CGCGGTATAAAACAAGTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRR
GSKDSQLR

Sequences:

>Translated_88_residues
MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRR
GSKDSQLR
>Mature_87_residues
ASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRG
SKDSQLR

Specific function: Unknown

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger

Homologues:

Organism=Escherichia coli, GI1787022, Length=88, Percent_Identity=100, Blast_Score=181, Evalue=6e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBII_ECOLI (P41039)

Other databases:

- EMBL:   L02123
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   C64817
- RefSeq:   AP_001434.1
- RefSeq:   NP_415324.1
- PDB:   2KGO
- PDBsum:   2KGO
- ProteinModelPortal:   P41039
- SMR:   P41039
- STRING:   P41039
- EnsemblBacteria:   EBESCT00000002120
- EnsemblBacteria:   EBESCT00000014234
- GeneID:   945434
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW0788
- KEGG:   eco:b0803
- EchoBASE:   EB2320
- EcoGene:   EG12421
- eggNOG:   COG1734
- GeneTree:   EBGT00050000011389
- HOGENOM:   HBG739784
- OMA:   FNRRGSK
- ProtClustDB:   PRK11019
- BioCyc:   EcoCyc:EG12421-MONOMER
- Genevestigator:   P41039
- InterPro:   IPR020460
- InterPro:   IPR000962
- InterPro:   IPR020458
- PRINTS:   PR00618

Pfam domain/function: PF01258 zf-dskA_traR

EC number: NA

Molecular weight: Translated: 9756; Mature: 9625

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS01102 ZF_DKSA_1; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLC
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHCCCCCEEE
IHCQQEKDLQKPAYTGYNRRGSKDSQLR
EECCCHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLC
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHCCCCCEEE
IHCQQEKDLQKPAYTGYNRRGSKDSQLR
EECCCHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503