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The map label for this gene is ybiJ

Identifier: 157160278

GI number: 157160278

Start: 864269

End: 864529

Strand: Reverse

Name: ybiJ

Synonym: EcHS_A0857

Alternate gene names: 157160278

Gene position: 864529-864269 (Counterclockwise)

Preceding gene: 157160279

Following gene: 157160274

Centisome position: 18.62

GC content: 50.57

Gene sequence:

>261_bases
ATGAAAACTATCAATACTGTTGTTGCTGCTATGGCTCTTTCAACTCTGTCATTTGGCGTGTTCGCGGCGGAACCGGTAAC
GGCATCCCAGGCACAGAACATGAATAAAATCGGCGTGGTTTCTGCCGATGGCGCATCCACCCTCGATGCCCTGGAAGCGA
AACTGGCTGAGAAAGCCGCGGCAGCCGGTGCCAGTGGATACAGCATCACTTCCGCCACCAACAACAATAAATTAAGCGGT
ACTGCGGTAATTTATAAGTAA

Upstream 100 bases:

>100_bases
GTCAATTCTCTTCGATTTTATCTCTCGTAAAAAAACGTGATACTCATCACATCGACGAAACAACGTCACTTATACAAAAA
TCACCTGCGAGAGATTAATT

Downstream 100 bases:

>100_bases
TTCGTAGGACGGATAAGGCGTTTACGCCGCATCCGGCAACAGATGCCTGATGCGACGCTACCGCGTCTTATCAGGCCTAC
AAAATCCGAACCGTTGGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAAAAGASGYSITSATNNNKLSG
TAVIYK

Sequences:

>Translated_86_residues
MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAAAAGASGYSITSATNNNKLSG
TAVIYK
>Mature_86_residues
MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAAAAGASGYSITSATNNNKLSG
TAVIYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BhsA/McbA family

Homologues:

Organism=Escherichia coli, GI1787021, Length=86, Percent_Identity=100, Blast_Score=166, Evalue=4e-43,
Organism=Escherichia coli, GI1787355, Length=86, Percent_Identity=46.5116279069767, Blast_Score=71, Evalue=1e-14,
Organism=Escherichia coli, GI87081785, Length=86, Percent_Identity=46.5116279069767, Blast_Score=70, Evalue=3e-14,
Organism=Escherichia coli, GI87082233, Length=88, Percent_Identity=45.4545454545455, Blast_Score=63, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBIJ_ECOL6 (P0AAX4)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_752816.1
- ProteinModelPortal:   P0AAX4
- SMR:   P0AAX4
- EnsemblBacteria:   EBESCT00000040552
- GeneID:   1037831
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c0886
- GeneTree:   EBGT00050000009057
- HOGENOM:   HBG677470
- OMA:   ITSTEHR
- ProtClustDB:   PRK10259
- InterPro:   IPR010854

Pfam domain/function: PF07338 DUF1471

EC number: NA

Molecular weight: Translated: 8568; Mature: 8568

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAA
CCHHHHHHHHHHHHHHHCCCEECCCCCCHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHH
AAGASGYSITSATNNNKLSGTAVIYK
HCCCCCCEEECCCCCCCCCCEEEEEC
>Mature Secondary Structure
MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAA
CCHHHHHHHHHHHHHHHCCCEECCCCCCHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHH
AAGASGYSITSATNNNKLSGTAVIYK
HCCCCCCEEECCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157