Definition Escherichia coli HS, complete genome.
Accession NC_009800
Length 4,643,538

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The map label for this gene is ybfP [H]

Identifier: 157160170

GI number: 157160170

Start: 745767

End: 746282

Strand: Direct

Name: ybfP [H]

Synonym: EcHS_A0737

Alternate gene names: 157160170

Gene position: 745767-746282 (Clockwise)

Preceding gene: 157160168

Following gene: 157160171

Centisome position: 16.06

GC content: 45.93

Gene sequence:

>516_bases
ATGAAGACCAACAGGAGTCTGGTCGTCATAGTGTCACTAATTACCGCCACATTACTGCTGACTGCATGCGCCCAACCTGA
ACAATCATCATTAGCTGGCGACTGGTTACTGACCCCTAAAGATAAAACCAGAGGATTAACGGGTAGCATTGCGGTAAATA
TTGCACCTTCCCGGTGTAAGACAAATTGCCGTGGTGATAACTTACCTGATAATACCCGCCGCTGGCAGTTGTCAGGCGGG
AACGAAAAAGAACTTACTTATCTTCATAATATGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACAC
CTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTCAGCGAAAGCGGAT
TTTTTGGCTCGATGATGCATGTCGGGATTATTGAGTTACGACGCTGCCAGTCAGAAAATTGCCAGCAAGAATTGAAAGCG
ATAAATACAGGTGATGCTGCCAACTTACTGATTTAG

Upstream 100 bases:

>100_bases
GAATTTACGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTG
AGTAGCTCAAGGAAATCCCA

Downstream 100 bases:

>100_bases
TGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGG
TGCGTAACGGCAAAAGCACC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRGLTGSIAVNIAPSRCKTNCRGDNLPDNTRRWQLSGG
NEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKA
INTGDAANLLI

Sequences:

>Translated_171_residues
MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRGLTGSIAVNIAPSRCKTNCRGDNLPDNTRRWQLSGG
NEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKA
INTGDAANLLI
>Mature_171_residues
MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRGLTGSIAVNIAPSRCKTNCRGDNLPDNTRRWQLSGG
NEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKA
INTGDAANLLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786905, Length=163, Percent_Identity=99.3865030674847, Blast_Score=339, Evalue=6e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18853; Mature: 18853

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRGLTGSIAVNIAPSRCK
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHCCCCCEEEEEECHHHHC
TNCRGDNLPDNTRRWQLSGGNEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGT
CCCCCCCCCCCCEEEEECCCCCCEEHHHHCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCC
RPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKAINTGDAANLLI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRGLTGSIAVNIAPSRCK
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHCCCCCEEEEEECHHHHC
TNCRGDNLPDNTRRWQLSGGNEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGT
CCCCCCCCCCCCEEEEECCCCCCEEHHHHCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCC
RPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKAINTGDAANLLI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]