Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is ybfP [H]
Identifier: 157160170
GI number: 157160170
Start: 745767
End: 746282
Strand: Direct
Name: ybfP [H]
Synonym: EcHS_A0737
Alternate gene names: 157160170
Gene position: 745767-746282 (Clockwise)
Preceding gene: 157160168
Following gene: 157160171
Centisome position: 16.06
GC content: 45.93
Gene sequence:
>516_bases ATGAAGACCAACAGGAGTCTGGTCGTCATAGTGTCACTAATTACCGCCACATTACTGCTGACTGCATGCGCCCAACCTGA ACAATCATCATTAGCTGGCGACTGGTTACTGACCCCTAAAGATAAAACCAGAGGATTAACGGGTAGCATTGCGGTAAATA TTGCACCTTCCCGGTGTAAGACAAATTGCCGTGGTGATAACTTACCTGATAATACCCGCCGCTGGCAGTTGTCAGGCGGG AACGAAAAAGAACTTACTTATCTTCATAATATGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACAC CTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTCAGCGAAAGCGGAT TTTTTGGCTCGATGATGCATGTCGGGATTATTGAGTTACGACGCTGCCAGTCAGAAAATTGCCAGCAAGAATTGAAAGCG ATAAATACAGGTGATGCTGCCAACTTACTGATTTAG
Upstream 100 bases:
>100_bases GAATTTACGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTG AGTAGCTCAAGGAAATCCCA
Downstream 100 bases:
>100_bases TGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGG TGCGTAACGGCAAAAGCACC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRGLTGSIAVNIAPSRCKTNCRGDNLPDNTRRWQLSGG NEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKA INTGDAANLLI
Sequences:
>Translated_171_residues MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRGLTGSIAVNIAPSRCKTNCRGDNLPDNTRRWQLSGG NEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKA INTGDAANLLI >Mature_171_residues MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRGLTGSIAVNIAPSRCKTNCRGDNLPDNTRRWQLSGG NEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKA INTGDAANLLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786905, Length=163, Percent_Identity=99.3865030674847, Blast_Score=339, Evalue=6e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18853; Mature: 18853
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRGLTGSIAVNIAPSRCK CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHCCCCCEEEEEECHHHHC TNCRGDNLPDNTRRWQLSGGNEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGT CCCCCCCCCCCCEEEEECCCCCCEEHHHHCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCC RPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKAINTGDAANLLI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRGLTGSIAVNIAPSRCK CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHCCCCCEEEEEECHHHHC TNCRGDNLPDNTRRWQLSGGNEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGT CCCCCCCCCCCCEEEEECCCCCCEEHHHHCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCC RPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKAINTGDAANLLI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]