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The map label for this gene is ybdJ [H]

Identifier: 157160072

GI number: 157160072

Start: 642032

End: 642280

Strand: Reverse

Name: ybdJ [H]

Synonym: EcHS_A0627

Alternate gene names: 157160072

Gene position: 642280-642032 (Counterclockwise)

Preceding gene: 157160073

Following gene: 157160071

Centisome position: 13.83

GC content: 49.8

Gene sequence:

>249_bases
ATGAAACACCCTTTAGAAACCTTGACCACCGCAGCAGGCATTTTGCTGATGGCTTTCCTCTCTTGCCTGCTGCTTCCCGC
CCCCGCATTGGGGCTGACGCTGGCACAAAAACTGGTGAGCACGTTCCATCTGATGGATCTTAGTCAGCTTTACACTTTAT
TGTTTTGTCTGTGGTTTTTAGTGCTGGGCGCTATTGAGTATTTTGTTCTGCGCTTTATCTGGCGACGCTGGTTCTCGCTG
GCGGATTAA

Upstream 100 bases:

>100_bases
TGAAAAAGCATTGTGAGATCTGGGCCGGTGACTAAGTCGGGAATTGCCTTACAGAAGAATATCCCTGACAATGGTGTTTT
AACTTACATTTAACAATGTT

Downstream 100 bases:

>100_bases
ACGTCGATTATCGCCGTACTTCGCGGCATACTTTGCTTATTCTCCTTCGCCTAAAGGAACGTTTATGGATAAGCAATCAC
TGCACGAAACGGCGAAACGC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKHPLETLTTAAGILLMAFLSCLLLPAPALGLTLAQKLVSTFHLMDLSQLYTLLFCLWFLVLGAIEYFVLRFIWRRWFSL
AD

Sequences:

>Translated_82_residues
MKHPLETLTTAAGILLMAFLSCLLLPAPALGLTLAQKLVSTFHLMDLSQLYTLLFCLWFLVLGAIEYFVLRFIWRRWFSL
AD
>Mature_82_residues
MKHPLETLTTAAGILLMAFLSCLLLPAPALGLTLAQKLVSTFHLMDLSQLYTLLFCLWFLVLGAIEYFVLRFIWRRWFSL
AD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786794, Length=82, Percent_Identity=96.3414634146341, Blast_Score=132, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010590
- ProDom:   PD027061 [H]

Pfam domain/function: PF06643 DUF1158 [H]

EC number: NA

Molecular weight: Translated: 9390; Mature: 9390

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHPLETLTTAAGILLMAFLSCLLLPAPALGLTLAQKLVSTFHLMDLSQLYTLLFCLWFL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGAIEYFVLRFIWRRWFSLAD
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKHPLETLTTAAGILLMAFLSCLLLPAPALGLTLAQKLVSTFHLMDLSQLYTLLFCLWFL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGAIEYFVLRFIWRRWFSLAD
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]