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The map label for this gene is sfmF [H]

Identifier: 157160058

GI number: 157160058

Start: 622868

End: 623383

Strand: Direct

Name: sfmF [H]

Synonym: EcHS_A0609

Alternate gene names: 157160058

Gene position: 622868-623383 (Clockwise)

Preceding gene: 157160057

Following gene: 157160064

Centisome position: 13.41

GC content: 49.81

Gene sequence:

>516_bases
ATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGTTACTGTGGAGTTCCAGTGGATGGGCAGCTGACCCTTTAGGAACGAT
TAATATCAATTTGCACGGTAACGTTGTTGATTTCTCCTGTACCGTAAACACAGCGGATATTGATAAGACGGTAGATTTAG
GCAGATGGCCTACGACACAATTACTGAACGCTGGCGATACCACGGCACTCGTCCCTTTTAGCCTGCGGCTGGAGGGATGT
CCTCCGGGTTCAGTTGCGATTTTATTTACGGGAACGCCGGCATCCGATACCAACCTGCTGGCTCTGGATGATCCCGCAAT
GGCACAAACCGTCGCCATCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAG
TAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCGGTGTTCGGCCAGGTGTGGCG
AAAGCGGATGCGATATTTATGATCAATTATAATTAA

Upstream 100 bases:

>100_bases
CTTCGCGCCTGGCCTATCAGTATTACCGGTCAAAAACCGACCGAGGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGA
TTATCAATGAGGTACGGAGA

Downstream 100 bases:

>100_bases
TATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATAAATATTAGA
TTTATGCGCACTAACTGTTT

Product: putative fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MRRVLFSCFCGLLWSSSGWAADPLGTININLHGNVVDFSCTVNTADIDKTVDLGRWPTTQLLNAGDTTALVPFSLRLEGC
PPGSVAILFTGTPASDTNLLALDDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVA
KADAIFMINYN

Sequences:

>Translated_171_residues
MRRVLFSCFCGLLWSSSGWAADPLGTININLHGNVVDFSCTVNTADIDKTVDLGRWPTTQLLNAGDTTALVPFSLRLEGC
PPGSVAILFTGTPASDTNLLALDDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVA
KADAIFMINYN
>Mature_171_residues
MRRVLFSCFCGLLWSSSGWAADPLGTININLHGNVVDFSCTVNTADIDKTVDLGRWPTTQLLNAGDTTALVPFSLRLEGC
PPGSVAILFTGTPASDTNLLALDDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVA
KADAIFMINYN

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1786746, Length=171, Percent_Identity=99.4152046783626, Blast_Score=345, Evalue=1e-96,
Organism=Escherichia coli, GI1786938, Length=186, Percent_Identity=28.494623655914, Blast_Score=64, Evalue=5e-12,
Organism=Escherichia coli, GI1790773, Length=181, Percent_Identity=33.1491712707182, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI1790769, Length=151, Percent_Identity=33.112582781457, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI87081753, Length=150, Percent_Identity=32, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1787781, Length=176, Percent_Identity=27.2727272727273, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18195; Mature: 18195

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVLFSCFCGLLWSSSGWAADPLGTININLHGNVVDFSCTVNTADIDKTVDLGRWPTTQ
CCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCEEECCCCCHHH
LLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLLALDDPAMAQTVAIELRNSDR
EECCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCEEEEEEEEECCCC
SRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIFMINYN
CEEEECCCCCCCCCCCCCCEEEEEEECCHHHHCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MRRVLFSCFCGLLWSSSGWAADPLGTININLHGNVVDFSCTVNTADIDKTVDLGRWPTTQ
CCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCEEECCCCCHHH
LLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLLALDDPAMAQTVAIELRNSDR
EECCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCEEEEEEEEECCCC
SRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIFMINYN
CEEEECCCCCCCCCCCCCCEEEEEEECCHHHHCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 2183007; 7984428 [H]