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The map label for this gene is groES

Identifier: 156980346

GI number: 156980346

Start: 2152101

End: 2152385

Strand: Reverse

Name: groES

Synonym: SAHV_2015

Alternate gene names: 156980346

Gene position: 2152385-2152101 (Counterclockwise)

Preceding gene: 156980348

Following gene: 156980345

Centisome position: 74.73

GC content: 34.39

Gene sequence:

>285_bases
ATGCTAAAACCAATTGGAAATCGTGTGATTATTGAGAAAAAAGAACAAGAACAAACAACTAAAAGTGGTATTGTTTTAAC
TGATAGTGCTAAAGAAAAATCAAACGAAGGCGTTATCGTTGCAGTAGGAACTGGACGTCTATTAAATGATGGTACAAGAG
TGACTCCTGAAGTGAAAGAAGGGGACCGTGTCGTGTTCCAACAATATGCTGGTACAGAAGTTAAACGAGATAATGAAACA
TATCTAGTATTAAATGAAGAAGATATTTTAGCGGTAATTGAATAA

Upstream 100 bases:

>100_bases
TTATGACTTGAAATTTTGACCAAATTTGATTATTATAAATGTATGTTAGCACTCTTTAATGTTAAGTGCTAAACTTTAGG
TTTTTTAAGGAGGAACAATC

Downstream 100 bases:

>100_bases
TATAAAATTAAATTCATAGATAAATTGTAAAGAACGAAAATGAAATATGACTAAACAAATGGAGGTTTATCATTTATGGT
TAAACAATTGAAATTCTCTG

Product: co-chaperonin GroES

Products: NA

Alternate protein names: GroES protein; Protein Cpn10

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MLKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNET
YLVLNEEDILAVIE

Sequences:

>Translated_94_residues
MLKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNET
YLVLNEEDILAVIE
>Mature_94_residues
MLKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNET
YLVLNEEDILAVIE

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family

Homologues:

Organism=Escherichia coli, GI1790585, Length=94, Percent_Identity=43.6170212765958, Blast_Score=76, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17555568, Length=93, Percent_Identity=35.4838709677419, Blast_Score=63, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6324594, Length=91, Percent_Identity=35.1648351648352, Blast_Score=60, Evalue=7e-11,
Organism=Drosophila melanogaster, GI21358317, Length=93, Percent_Identity=39.7849462365591, Blast_Score=64, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356029, Length=94, Percent_Identity=39.3617021276596, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): CH10_STAA1 (A7X4J3)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001442605.1
- ProteinModelPortal:   A7X4J3
- SMR:   A7X4J3
- STRING:   A7X4J3
- EnsemblBacteria:   EBSTAT00000004073
- GeneID:   5559103
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_2015
- eggNOG:   COG0234
- GeneTree:   EBGT00050000025210
- HOGENOM:   HBG703377
- OMA:   RVIYARY
- ProtClustDB:   PRK00364
- BioCyc:   SAUR418127:SAHV_2015-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00580
- InterPro:   IPR020818
- InterPro:   IPR018369
- InterPro:   IPR011032
- Gene3D:   G3DSA:2.30.33.40
- PANTHER:   PTHR10772
- PRINTS:   PR00297
- SMART:   SM00883

Pfam domain/function: PF00166 Cpn10; SSF50129 GroES_like

EC number: NA

Molecular weight: Translated: 10416; Mature: 10416

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00681 CHAPERONINS_CPN10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKE
CCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCEEECCCCEECCCCCC
GDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE
CCEEEEEECCCCEEECCCCEEEEECCCCEEEEEC
>Mature Secondary Structure
MLKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKE
CCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCEEECCCCEECCCCCC
GDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE
CCEEEEEECCCCEEECCCCEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA