Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
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Accession | NC_009784 |
Length | 2,204,018 |
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The map label for this gene is insG [H]
Identifier: 156977124
GI number: 156977124
Start: 1100400
End: 1101761
Strand: Reverse
Name: insG [H]
Synonym: VIBHAR_05910
Alternate gene names: 156977124
Gene position: 1101761-1100400 (Counterclockwise)
Preceding gene: 156977125
Following gene: 156977123
Centisome position: 49.99
GC content: 43.17
Gene sequence:
>1362_bases ATGATAATCCCCACTAACAACGTTAGTGGGGATTTTTTTATGTTTGCTCAAGAGTTGGTTTTGGCTCATGAAACAGTAGA GGATGGTAAAAACTACGAGTCTGTAGTTAATGCCATTCAACTTGAATGGATAGAACAAGCTTTGCTTGATACATCTAAAG CAAGTATTAGGAGACGACGTTTACCAGCGCAACAAGCGGTTTGGCTTGTTATTTGGATGGGACTGCAACGGAATAAATCA ATTAAGGAAGTGTGTAGTTCTCTTGACTTAGCTCTTCAACCCGAACCTCAGAATACATGGTCTCGTGTTGCACCTAGTGT GCTAACTGACTCTAGGCGACGTTTAGATGAGGCACCTCTTGCCGCTTTGTTTAAAACCTCTGTGGCGGCTTGGGAGAGCG ACGCACTAGTAAAAGATAAGATGCTAGGGCTAAGCATCATGGCCGTGGATGGTACAACTTTTCGTTGTCAAGATTCAGAA GACAATGCGAAAGCATTTGGATTCATTTCTCAAAAACATAAACCTTACCCTCAACTTCGCTTAGTCGGCCTGATGGCGAC CGAGACACGCTTTATGATGGGGGCTGCATTCGATGCTTGTCAGGTTGGCGAGGCAACGTTAGCACGCAGATTATTAGCAG ACGTTCCAGCCAACTCGCTAACATTGTTTGATCGTTGCTACTTTTCCGCCGACCTGTTGATATCGTGGAATGCAGCAGCC TCCAATAGTCACTGGCTAACCCCTGTAAAACGGAAATTAAGATATGAAGTTGTAGAGCACTTTGCTGAAAACGACATGCT TATTTCTATGCCTATCTCACCACAAGCTCAGCGTAATAACCCTAATTTACCGACTCATTGGCAGGCACGCCTCATCCTCT ATAAAGACCCAAAAGGTGAAATTGAAGGCTTTATAACTTCCCTTGTTGATCCTGAGAAATACTCATTAGAAGATTTATTA GCTGTCTATTGGCAACGTTGGGAAATAGAAGAAGGTTACGGTGAGATAAAGCAAACTCAGCTACAAAGCGAGGTTACCTT GAGAAGTCGTTTTGCTGTTGGTGTTAGACAAGAGCTTTGGGGAATACTGCTAGCGTACAATTTGGTGCGCTTAGAGATGA TTCATATTGCTCAAGACGCCGATGTAAGCCCAACTAGAGTTAGCTTTACAGCGGCAATAAACTTAATAGACACCCAGTTA CGTTGGTTGGCACTGAGTCCTGATGGAACTCTACCGAGCAAACTCAAGCAAATGAGGGAAAGCATAAGTCACTTCATTTT ACCGGATAAAAGAAAGGACCGAACGTATCCACGTTCAGTCCTTTTTGTCCCTACAAAATATCCATTTAGATATAAGCATT AA
Upstream 100 bases:
>100_bases ATCGGTATGTACCGTTAATCTGAGTGAAAATCGAATTCGAAATGCCGGCTTAATCGCCTAATGCCGATCGGTTTAGAGAC TTGAATGATCTTGGGATCGT
Downstream 100 bases:
>100_bases TGCTTATCCGAACGGCATTGGGCTTAATCGCCGGCATTTTTGTATCTGCAATGTAAGCGCTCCATAAAACCCGCATTCTA ATCGCCTAGCGCGAAGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MIIPTNNVSGDFFMFAQELVLAHETVEDGKNYESVVNAIQLEWIEQALLDTSKASIRRRRLPAQQAVWLVIWMGLQRNKS IKEVCSSLDLALQPEPQNTWSRVAPSVLTDSRRRLDEAPLAALFKTSVAAWESDALVKDKMLGLSIMAVDGTTFRCQDSE DNAKAFGFISQKHKPYPQLRLVGLMATETRFMMGAAFDACQVGEATLARRLLADVPANSLTLFDRCYFSADLLISWNAAA SNSHWLTPVKRKLRYEVVEHFAENDMLISMPISPQAQRNNPNLPTHWQARLILYKDPKGEIEGFITSLVDPEKYSLEDLL AVYWQRWEIEEGYGEIKQTQLQSEVTLRSRFAVGVRQELWGILLAYNLVRLEMIHIAQDADVSPTRVSFTAAINLIDTQL RWLALSPDGTLPSKLKQMRESISHFILPDKRKDRTYPRSVLFVPTKYPFRYKH
Sequences:
>Translated_453_residues MIIPTNNVSGDFFMFAQELVLAHETVEDGKNYESVVNAIQLEWIEQALLDTSKASIRRRRLPAQQAVWLVIWMGLQRNKS IKEVCSSLDLALQPEPQNTWSRVAPSVLTDSRRRLDEAPLAALFKTSVAAWESDALVKDKMLGLSIMAVDGTTFRCQDSE DNAKAFGFISQKHKPYPQLRLVGLMATETRFMMGAAFDACQVGEATLARRLLADVPANSLTLFDRCYFSADLLISWNAAA SNSHWLTPVKRKLRYEVVEHFAENDMLISMPISPQAQRNNPNLPTHWQARLILYKDPKGEIEGFITSLVDPEKYSLEDLL AVYWQRWEIEEGYGEIKQTQLQSEVTLRSRFAVGVRQELWGILLAYNLVRLEMIHIAQDADVSPTRVSFTAAINLIDTQL RWLALSPDGTLPSKLKQMRESISHFILPDKRKDRTYPRSVLFVPTKYPFRYKH >Mature_453_residues MIIPTNNVSGDFFMFAQELVLAHETVEDGKNYESVVNAIQLEWIEQALLDTSKASIRRRRLPAQQAVWLVIWMGLQRNKS IKEVCSSLDLALQPEPQNTWSRVAPSVLTDSRRRLDEAPLAALFKTSVAAWESDALVKDKMLGLSIMAVDGTTFRCQDSE DNAKAFGFISQKHKPYPQLRLVGLMATETRFMMGAAFDACQVGEATLARRLLADVPANSLTLFDRCYFSADLLISWNAAA SNSHWLTPVKRKLRYEVVEHFAENDMLISMPISPQAQRNNPNLPTHWQARLILYKDPKGEIEGFITSLVDPEKYSLEDLL AVYWQRWEIEEGYGEIKQTQLQSEVTLRSRFAVGVRQELWGILLAYNLVRLEMIHIAQDADVSPTRVSFTAAINLIDTQL RWLALSPDGTLPSKLKQMRESISHFILPDKRKDRTYPRSVLFVPTKYPFRYKH
Specific function: Involved in the transposition of the insertion sequence IS4 [H]
COG id: COG3385
COG function: function code L; FOG: Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
Organism=Escherichia coli, GI1790729, Length=418, Percent_Identity=32.5358851674641, Blast_Score=235, Evalue=5e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 - InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 51719; Mature: 51719
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIPTNNVSGDFFMFAQELVLAHETVEDGKNYESVVNAIQLEWIEQALLDTSKASIRRRR CEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHC LPAQQAVWLVIWMGLQRNKSIKEVCSSLDLALQPEPQNTWSRVAPSVLTDSRRRLDEAPL CCHHHHEEEEEEECCCCCCCHHHHHHHCCCEECCCCCCHHHHHCHHHHHHHHHHHHHHHH AALFKTSVAAWESDALVKDKMLGLSIMAVDGTTFRCQDSEDNAKAFGFISQKHKPYPQLR HHHHHHHHHHCCCCCHHHHHHCCEEEEEECCCEEEECCCCCCCHHEEEHHHCCCCCCCEE LVGLMATETRFMMGAAFDACQVGEATLARRLLADVPANSLTLFDRCYFSADLLISWNAAA EEEEEHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCCCEEHHHHHHCCEEEEEEECCCC SNSHWLTPVKRKLRYEVVEHFAENDMLISMPISPQAQRNNPNLPTHWQARLILYKDPKGE CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCHH IEGFITSLVDPEKYSLEDLLAVYWQRWEIEEGYGEIKQTQLQSEVTLRSRFAVGVRQELW HHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GILLAYNLVRLEMIHIAQDADVSPTRVSFTAAINLIDTQLRWLALSPDGTLPSKLKQMRE HHHHHHHHHHHHHEEEECCCCCCCCEEEEEHEEHHEECCEEEEEECCCCCCHHHHHHHHH SISHFILPDKRKDRTYPRSVLFVPTKYPFRYKH HHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MIIPTNNVSGDFFMFAQELVLAHETVEDGKNYESVVNAIQLEWIEQALLDTSKASIRRRR CEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHC LPAQQAVWLVIWMGLQRNKSIKEVCSSLDLALQPEPQNTWSRVAPSVLTDSRRRLDEAPL CCHHHHEEEEEEECCCCCCCHHHHHHHCCCEECCCCCCHHHHHCHHHHHHHHHHHHHHHH AALFKTSVAAWESDALVKDKMLGLSIMAVDGTTFRCQDSEDNAKAFGFISQKHKPYPQLR HHHHHHHHHHCCCCCHHHHHHCCEEEEEECCCEEEECCCCCCCHHEEEHHHCCCCCCCEE LVGLMATETRFMMGAAFDACQVGEATLARRLLADVPANSLTLFDRCYFSADLLISWNAAA EEEEEHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCCCEEHHHHHHCCEEEEEEECCCC SNSHWLTPVKRKLRYEVVEHFAENDMLISMPISPQAQRNNPNLPTHWQARLILYKDPKGE CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCHH IEGFITSLVDPEKYSLEDLLAVYWQRWEIEEGYGEIKQTQLQSEVTLRSRFAVGVRQELW HHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GILLAYNLVRLEMIHIAQDADVSPTRVSFTAAINLIDTQLRWLALSPDGTLPSKLKQMRE HHHHHHHHHHHHHEEEECCCCCCCCEEEEEHEEHHEECCEEEEEECCCCCCHHHHHHHHH SISHFILPDKRKDRTYPRSVLFVPTKYPFRYKH HHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6268937; 7610040; 9278503 [H]