Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
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Accession | NC_009784 |
Length | 2,204,018 |
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The map label for this gene is 156977123
Identifier: 156977123
GI number: 156977123
Start: 1099956
End: 1100282
Strand: Reverse
Name: 156977123
Synonym: VIBHAR_05909
Alternate gene names: NA
Gene position: 1100282-1099956 (Counterclockwise)
Preceding gene: 156977124
Following gene: 156977121
Centisome position: 49.92
GC content: 45.57
Gene sequence:
>327_bases ATGAGGAGATTTGAAATGGGAAAACGACACACTAATCAAGAATGGCAAACGCTCATCGAGCAGTCTGAATCGAGTTCATT GTCAACGCTTGCATTTTGTAAGCTTAATGAACTCAATCCCTCGACGTTTTATGCTAAGCGCCAGCAACTCAAAAAAGCAG ATGTCTCTCAAGGCTTTGTACGGGCAGAGGTCGTCGAAAAGACAACGAAATATCAAGCTCAAATAGCCACCGCTAACATG ACACTTCTCATCAATGATGTGGAGTTGAGCATTCCTCAAGGCACGCCCGCTGCCTACCTGGCAGAACTCATTGGAGCCTT GTCATGA
Upstream 100 bases:
>100_bases TTGGGCTTAATCGCCGGCATTTTTGTATCTGCAATGTAAGCGCTCCATAAAACCCGCATTCTAATCGCCTAGCGCGAAGA ATAAGATCAAGTCTCCAACC
Downstream 100 bases:
>100_bases AACATATGCTCAGCGCACCAGAGATTTATCTGTATCGTGAGAGTGTCGATTTTAGAAAGTCCATCAATGGCCTCGCGGCG ATTATCGAAAGTGACACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MRRFEMGKRHTNQEWQTLIEQSESSSLSTLAFCKLNELNPSTFYAKRQQLKKADVSQGFVRAEVVEKTTKYQAQIATANM TLLINDVELSIPQGTPAAYLAELIGALS
Sequences:
>Translated_108_residues MRRFEMGKRHTNQEWQTLIEQSESSSLSTLAFCKLNELNPSTFYAKRQQLKKADVSQGFVRAEVVEKTTKYQAQIATANM TLLINDVELSIPQGTPAAYLAELIGALS >Mature_108_residues MRRFEMGKRHTNQEWQTLIEQSESSSLSTLAFCKLNELNPSTFYAKRQQLKKADVSQGFVRAEVVEKTTKYQAQIATANM TLLINDVELSIPQGTPAAYLAELIGALS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12125; Mature: 12125
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFEMGKRHTNQEWQTLIEQSESSSLSTLAFCKLNELNPSTFYAKRQQLKKADVSQGFV CCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHH RAEVVEKTTKYQAQIATANMTLLINDVELSIPQGTPAAYLAELIGALS HHHHHHHHHHHHHHEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRRFEMGKRHTNQEWQTLIEQSESSSLSTLAFCKLNELNPSTFYAKRQQLKKADVSQGFV CCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHH RAEVVEKTTKYQAQIATANMTLLINDVELSIPQGTPAAYLAELIGALS HHHHHHHHHHHHHHEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA