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The map label for this gene is ycfF [C]

Identifier: 156937887

GI number: 156937887

Start: 980355

End: 980768

Strand: Direct

Name: ycfF [C]

Synonym: Igni_1099

Alternate gene names: 156937887

Gene position: 980355-980768 (Clockwise)

Preceding gene: 156937886

Following gene: 156937888

Centisome position: 75.56

GC content: 56.52

Gene sequence:

>414_bases
TTGGAGGAGTGCGTGTTTTGTAAGATAGTCAGGGGAGAGCTCCCCTCGTGGAAGGTCTACGAGGACGAGGACGTGGTCGC
CTTCTTAGACATAAACCCCGCCACGCCGGGCCACACCTTGGTCGTGCCCAAACAGCACTATAGGAACATCTTGGACACTC
CGGACGAGGTAGTAGCGAAGGTGTTCAAAGTAGCGAAGAAGATCTCAGAGGCGGTCGTAAAGGGTTTGGGGGCTAAGGGG
GTGAACGTCATAACCAACGCCGAAGGGGTCGCGGGGCAAGTGGTATTCCACTTCCACGTCCACGTGGTCCCGAGGTACTC
CCCGGACGAGCTGAAGTTCCAGTACACGCCGAAGAAGTACTCCGAAGAGGAGGCGCAAGAGGTCGCTAGGAAGATAAGAG
AAGCTCTCGGATGA

Upstream 100 bases:

>100_bases
AGTGTTGGAGGTCAAGGTCCAAAAGATACCGGCAGAGATAGCGGTGACCAGCGTCCAACGCTCATAACCTCTCCTCCGGG
CCCCTTCCAGGAGGGGCCCG

Downstream 100 bases:

>100_bases
TTTTATTTTCCCCAGACCCCAAGCCTTGGGTAACGAGGAGTGGAGCTTCCGAACAAATGGTATAACATACTCCCCGACCT
CCCCAAGCCCTTGGCCCCTC

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MEECVFCKIVRGELPSWKVYEDEDVVAFLDINPATPGHTLVVPKQHYRNILDTPDEVVAKVFKVAKKISEAVVKGLGAKG
VNVITNAEGVAGQVVFHFHVHVVPRYSPDELKFQYTPKKYSEEEAQEVARKIREALG

Sequences:

>Translated_137_residues
MEECVFCKIVRGELPSWKVYEDEDVVAFLDINPATPGHTLVVPKQHYRNILDTPDEVVAKVFKVAKKISEAVVKGLGAKG
VNVITNAEGVAGQVVFHFHVHVVPRYSPDELKFQYTPKKYSEEEAQEVARKIREALG
>Mature_137_residues
MEECVFCKIVRGELPSWKVYEDEDVVAFLDINPATPGHTLVVPKQHYRNILDTPDEVVAKVFKVAKKISEAVVKGLGAKG
VNVITNAEGVAGQVVFHFHVHVVPRYSPDELKFQYTPKKYSEEEAQEVARKIREALG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=104, Percent_Identity=35.5769230769231, Blast_Score=68, Evalue=3e-12,
Organism=Escherichia coli, GI1787346, Length=105, Percent_Identity=36.1904761904762, Blast_Score=67, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17506713, Length=106, Percent_Identity=34.9056603773585, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6320078, Length=102, Percent_Identity=38.2352941176471, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 15362; Mature: 15362

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEECVFCKIVRGELPSWKVYEDEDVVAFLDINPATPGHTLVVPKQHYRNILDTPDEVVAK
CCCCEEEEEECCCCCCCEEECCCCEEEEEECCCCCCCCEEEECHHHHHHHCCCHHHHHHH
VFKVAKKISEAVVKGLGAKGVNVITNAEGVAGQVVFHFHVHVVPRYSPDELKFQYTPKKY
HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEEEEEECCCCCCCEEEEECCCCC
SEEEAQEVARKIREALG
CHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEECVFCKIVRGELPSWKVYEDEDVVAFLDINPATPGHTLVVPKQHYRNILDTPDEVVAK
CCCCEEEEEECCCCCCCEEECCCCEEEEEECCCCCCCCEEEECHHHHHHHCCCHHHHHHH
VFKVAKKISEAVVKGLGAKGVNVITNAEGVAGQVVFHFHVHVVPRYSPDELKFQYTPKKY
HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEEEEEECCCCCCCEEEEECCCCC
SEEEAQEVARKIREALG
CHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978084; 9403685 [H]