Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
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Accession | NC_009776 |
Length | 1,297,538 |
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The map label for this gene is 156937871
Identifier: 156937871
GI number: 156937871
Start: 965137
End: 965898
Strand: Direct
Name: 156937871
Synonym: Igni_1083
Alternate gene names: NA
Gene position: 965137-965898 (Clockwise)
Preceding gene: 156937867
Following gene: 156937877
Centisome position: 74.38
GC content: 56.43
Gene sequence:
>762_bases TTGCCTCCCCCAGCGCCCTTCGGGAAGCGGTCGTTGGGCGACCCGATAGAGGACTTGACGAAAACGTTGCTGTCCTTAAC CGAGCGCTACGGCCTCTTCGGAGTTTTCTTAATATCCTTCGTGGGCAACGCCATACCGTACGCCACGGTCCCCTACTTAG CCTTGATAGCGGCCCTAGCGGCCCAGAAGAGCTTGACCCTCCCGGAGGCGGTTCTCTGGTCCGTAGTGGGGGGCTTGGGG GCTGCCTTGGGGAAGGTAGTGGTCTACTTGACCGGCGTGGGCACCTCAGAGCTCTTGCCGGAGAAGGTGAGGAAGAACTT CGAGTTGTTCTCTAAGATAGCCCAGAGGGGGATATTCGTAGCGGTGTTCTTGTTCGCCGCCCTGCCCCTCCCGGACGACG TGCTGTACGTCCCGCTGGGCGTGGCTAGGTACCCCTTGATCAAGTTCTTCTTCGCAGTCTGGTTGGGCAAAATAATAATT ACCTTCTTAAGCATAGCTTTCGGGAACGCGTACTCGAGGATCATGGAGGAGTACAACGTAAACGCTACGGAGAGCGCCAT AATATTGATAGTTGCCACAGTGGTGTTGATGGTAATAATAGGCAGGATGGACTGGGCCAGGATAGCGATAGCCCTCTCCC AGAGGGGCACCTTGTACGCGCTGTACGTGATGAGCGACGAGCTGGCAAAGGCCATAGGCCTCAAGTGGCTGGCCAGAAAA ATCTCCTCACTTCTTTCCAAACCTGAGGGAGCTGGTCACTAG
Upstream 100 bases:
>100_bases ATCCTCTTCCTCTAGGAGCTCCTCCTCTTCTAGCTCTATGAACCTCTCCTCGAAGGACACGCCCGGCCCCTGCGGGGCTG GCTCGAGGTCGAGATAAATC
Downstream 100 bases:
>100_bases CACCTCGCTCTCGAATATCTTTATTGTTACCCACAGCAAGGCCGCCGTGGCCGCCACCATGGCCCCCACGCTCCCCGCGG CCTCCACCCAAGCGCCCTTC
Product: SNARE associated Golgi protein
Products: NA
Alternate protein names: SNARE Associated Golgi Protein-Like Protein
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MPPPAPFGKRSLGDPIEDLTKTLLSLTERYGLFGVFLISFVGNAIPYATVPYLALIAALAAQKSLTLPEAVLWSVVGGLG AALGKVVVYLTGVGTSELLPEKVRKNFELFSKIAQRGIFVAVFLFAALPLPDDVLYVPLGVARYPLIKFFFAVWLGKIII TFLSIAFGNAYSRIMEEYNVNATESAIILIVATVVLMVIIGRMDWARIAIALSQRGTLYALYVMSDELAKAIGLKWLARK ISSLLSKPEGAGH
Sequences:
>Translated_253_residues MPPPAPFGKRSLGDPIEDLTKTLLSLTERYGLFGVFLISFVGNAIPYATVPYLALIAALAAQKSLTLPEAVLWSVVGGLG AALGKVVVYLTGVGTSELLPEKVRKNFELFSKIAQRGIFVAVFLFAALPLPDDVLYVPLGVARYPLIKFFFAVWLGKIII TFLSIAFGNAYSRIMEEYNVNATESAIILIVATVVLMVIIGRMDWARIAIALSQRGTLYALYVMSDELAKAIGLKWLARK ISSLLSKPEGAGH >Mature_252_residues PPPAPFGKRSLGDPIEDLTKTLLSLTERYGLFGVFLISFVGNAIPYATVPYLALIAALAAQKSLTLPEAVLWSVVGGLGA ALGKVVVYLTGVGTSELLPEKVRKNFELFSKIAQRGIFVAVFLFAALPLPDDVLYVPLGVARYPLIKFFFAVWLGKIIIT FLSIAFGNAYSRIMEEYNVNATESAIILIVATVVLMVIIGRMDWARIAIALSQRGTLYALYVMSDELAKAIGLKWLARKI SSLLSKPEGAGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27437; Mature: 27306
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPAPFGKRSLGDPIEDLTKTLLSLTERYGLFGVFLISFVGNAIPYATVPYLALIAALA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AQKSLTLPEAVLWSVVGGLGAALGKVVVYLTGVGTSELLPEKVRKNFELFSKIAQRGIFV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AVFLFAALPLPDDVLYVPLGVARYPLIKFFFAVWLGKIIITFLSIAFGNAYSRIMEEYNV HHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NATESAIILIVATVVLMVIIGRMDWARIAIALSQRGTLYALYVMSDELAKAIGLKWLARK CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHH ISSLLSKPEGAGH HHHHHCCCCCCCC >Mature Secondary Structure PPPAPFGKRSLGDPIEDLTKTLLSLTERYGLFGVFLISFVGNAIPYATVPYLALIAALA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AQKSLTLPEAVLWSVVGGLGAALGKVVVYLTGVGTSELLPEKVRKNFELFSKIAQRGIFV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AVFLFAALPLPDDVLYVPLGVARYPLIKFFFAVWLGKIIITFLSIAFGNAYSRIMEEYNV HHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NATESAIILIVATVVLMVIIGRMDWARIAIALSQRGTLYALYVMSDELAKAIGLKWLARK CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHH ISSLLSKPEGAGH HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA