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The map label for this gene is deoC [H]

Identifier: 156937867

GI number: 156937867

Start: 961722

End: 962459

Strand: Direct

Name: deoC [H]

Synonym: Igni_1079

Alternate gene names: 156937867

Gene position: 961722-962459 (Clockwise)

Preceding gene: 156937861

Following gene: 156937871

Centisome position: 74.12

GC content: 61.11

Gene sequence:

>738_bases
ATGCTCCACACATTAAGCTCCGCCCTCCCCCGAGTTCGACGGGCGCCCGAGGTGGACGTGCTCTCCTTGGTTAAGGCTTA
CGGGCCCGAGGAGCTGGCCTCCCGGATAGACCAGACCCTCTTGGTCTCCACCTACGAGCAAGCCAAGGCCTTCGCCGAAA
GGTCCTCTAAGTACCCCTTTAGGTCCTTAGTGGGCTTTCCCAGGGCGGTGAGGGCCTTCAAGGAGGTCTGGAAGGGTAGG
ACTTGCGCGGTCGTCAACTTCCCCTTCGGCGAGTCCCCGCTGAAGGCGGTGGAGGCGGAATTGGAGGAGGCTTGGGACGC
CGGGGCGGAGGAGGTCGACGTGGTGGCCTCCCCCTACTTGGCGAAGGACGACATTAACAAGTACGGGGAGTACGTGAGGG
AGATCTTAGGCGCGGCGAGGGCGGTGGGCTTCGACGTCGTGAAGGTCATAGTCGAGGCCCCCGTGCTGAGCGATGAAGAA
CTTGCGAGGGTGGCGAAGGTGATATACGACCTAGGGGCAGACTTCTTGAAGACCGCCACGGGCACTTTACACAAGACCAG
TTTGAGGGACGTGTACGTGGTCAAGAGGGCGGCGCCGGGGCTGGAGGTGAAGGCCTCCGGAGGGATAAGGGAGCCGGTGC
AAGCGCTCTCCTTCATAGAGACCGGGGCCTCAGTTATAGGCACCAGCACCGGCATAGAGATAGTTGAAGAGTTGAAGAGG
ATAAAGGAGGTCGGTTGA

Upstream 100 bases:

>100_bases
CATTGAGGCTGCCCACGCGCCGCTCTCGAAGTACTTGCCGGGCCTAACTGCCAACCCCTGCGACCCGGCGCAAGCTTGAC
TATACGGCATATATCTGCCT

Downstream 100 bases:

>100_bases
GACAGGTCCGATCACCGCTCACGTCCCGTGGCTCCTCATCCCCCGTGAGGAAACGACGGTAAGCCGAAAGGTGGGGAGCG
TTTCCCCTTACCGAGGGGTT

Product: deoxyribose-phosphate aldolase

Products: NA

Alternate protein names: Phosphodeoxyriboaldolase; DERA; Deoxyriboaldolase [H]

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLHTLSSALPRVRRAPEVDVLSLVKAYGPEELASRIDQTLLVSTYEQAKAFAERSSKYPFRSLVGFPRAVRAFKEVWKGR
TCAVVNFPFGESPLKAVEAELEEAWDAGAEEVDVVASPYLAKDDINKYGEYVREILGAARAVGFDVVKVIVEAPVLSDEE
LARVAKVIYDLGADFLKTATGTLHKTSLRDVYVVKRAAPGLEVKASGGIREPVQALSFIETGASVIGTSTGIEIVEELKR
IKEVG

Sequences:

>Translated_245_residues
MLHTLSSALPRVRRAPEVDVLSLVKAYGPEELASRIDQTLLVSTYEQAKAFAERSSKYPFRSLVGFPRAVRAFKEVWKGR
TCAVVNFPFGESPLKAVEAELEEAWDAGAEEVDVVASPYLAKDDINKYGEYVREILGAARAVGFDVVKVIVEAPVLSDEE
LARVAKVIYDLGADFLKTATGTLHKTSLRDVYVVKRAAPGLEVKASGGIREPVQALSFIETGASVIGTSTGIEIVEELKR
IKEVG
>Mature_245_residues
MLHTLSSALPRVRRAPEVDVLSLVKAYGPEELASRIDQTLLVSTYEQAKAFAERSSKYPFRSLVGFPRAVRAFKEVWKGR
TCAVVNFPFGESPLKAVEAELEEAWDAGAEEVDVVASPYLAKDDINKYGEYVREILGAARAVGFDVVKVIVEAPVLSDEE
LARVAKVIYDLGADFLKTATGTLHKTSLRDVYVVKRAAPGLEVKASGGIREPVQALSFIETGASVIGTSTGIEIVEELKR
IKEVG

Specific function: Nucleotide and deoxyribonucleotide catabolism. [C]

COG id: COG0274

COG function: function code F; Deoxyribose-phosphate aldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the deoC/fbaB aldolase family. DeoC type 1 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011343
- InterPro:   IPR002915
- InterPro:   IPR022979 [H]

Pfam domain/function: PF01791 DeoC [H]

EC number: =4.1.2.4 [H]

Molecular weight: Translated: 26669; Mature: 26669

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHTLSSALPRVRRAPEVDVLSLVKAYGPEELASRIDQTLLVSTYEQAKAFAERSSKYPF
CCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
RSLVGFPRAVRAFKEVWKGRTCAVVNFPFGESPLKAVEAELEEAWDAGAEEVDVVASPYL
HHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCC
AKDDINKYGEYVREILGAARAVGFDVVKVIVEAPVLSDEELARVAKVIYDLGADFLKTAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHC
GTLHKTSLRDVYVVKRAAPGLEVKASGGIREPVQALSFIETGASVIGTSTGIEIVEELKR
CCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IKEVG
HHHCC
>Mature Secondary Structure
MLHTLSSALPRVRRAPEVDVLSLVKAYGPEELASRIDQTLLVSTYEQAKAFAERSSKYPF
CCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
RSLVGFPRAVRAFKEVWKGRTCAVVNFPFGESPLKAVEAELEEAWDAGAEEVDVVASPYL
HHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCC
AKDDINKYGEYVREILGAARAVGFDVVKVIVEAPVLSDEELARVAKVIYDLGADFLKTAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHC
GTLHKTSLRDVYVVKRAAPGLEVKASGGIREPVQALSFIETGASVIGTSTGIEIVEELKR
CCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IKEVG
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA