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The map label for this gene is idsA [H]

Identifier: 156937132

GI number: 156937132

Start: 296321

End: 297136

Strand: Reverse

Name: idsA [H]

Synonym: Igni_0338

Alternate gene names: 156937132

Gene position: 297136-296321 (Counterclockwise)

Preceding gene: 156937134

Following gene: 156937131

Centisome position: 22.9

GC content: 56.62

Gene sequence:

>816_bases
GTGAACGAAATACAGCGAGCGCTCGAAAAGTGGAGAAATATAATTGACAAAGAGTTAGAGGAACTTATCAAAAATACTTA
CGAGGAGAGGGTGATAAACGTAGCGAAGTACATAGTGAACGGGGGGAAGAGGCTCAGGGGAGCGCTGGTCATGCTGGTCA
ACGAGGCCTTAGGGGGGAACCCGGAGGACGCCTTGCCGGCCGCCCTGGCGCTGGAGCTGGTCCACGCGAGCTCCCTCTCA
ATAGACGACATAATAGACTTGGACTTCGTTAGGCGCGGGAGGCCCAGCGCTTGGGTAGCCAAGGGGGTCGCCAATACCGT
AATGGTGAGTAACTTGTTAATTCCCCACGCTATAATGTTGGTTAAGAGGTACGGGAAGAGGGCAATTGACAAAGTTGTGG
AAGTGTGGTGGGAGGTGAGCAAGGGGGAGGTCTGGGACGTCCACGGCCCCCCGGAGGGCAAGGGAGTGGAAGCTTACGAA
GCTATAATAGAGGCCAAGACCGCCTCCATGTTTGCCCTCTCAGCTTATTTGGGCGGCTTGGCCGCGGGGGAGGAGGAGAG
GCTGGAGGGCCTCTGGAGGTACGGCTTCTTGTTGGGTAAGGCCTACCAAATAGCTGACGACTTGAAGGACGTGGAGGGCG
ACGCCAGCTTCTCCGCCAAGCTGTTTAGGGAGTGGTTGAAGGAGGCCGGGAAGGAGGGGGTATTGAAGAGGTTGAAGGAG
ATAGTTGAGGAGTGCGAGAGGATAGGCTCCGAGTTCGGCCCCTTGCTGGCGAGCTTCCCCCGGAGGGGGGTCGAGCTAAT
GGGAGTGAAACTATGA

Upstream 100 bases:

>100_bases
CCCCGGGTAGGGGTTCCTGCAGGTAAGTAATATCTCTGTGTACCGCCCGGCGACCAACTCCTTATTTCCATCGCCCCAGC
CCCTCGGAGGGTAGGCTTCA

Downstream 100 bases:

>100_bases
CTTTCGACCGGAGGAGGGCCTCCGAGCTCCAGAGGAAGCTCTCCGAGCTGGTGAAGGAGGAGGACTGCTTCGATCCGGAG
GCGGTAGAGGCGGTGGGCGG

Product: polyprenyl synthetase

Products: NA

Alternate protein names: (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; Farnesyl diphosphate synthase; Farnesyl pyrophosphate synthase; FPP synthase; Geranyltranstransferase [H]

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MNEIQRALEKWRNIIDKELEELIKNTYEERVINVAKYIVNGGKRLRGALVMLVNEALGGNPEDALPAALALELVHASSLS
IDDIIDLDFVRRGRPSAWVAKGVANTVMVSNLLIPHAIMLVKRYGKRAIDKVVEVWWEVSKGEVWDVHGPPEGKGVEAYE
AIIEAKTASMFALSAYLGGLAAGEEERLEGLWRYGFLLGKAYQIADDLKDVEGDASFSAKLFREWLKEAGKEGVLKRLKE
IVEECERIGSEFGPLLASFPRRGVELMGVKL

Sequences:

>Translated_271_residues
MNEIQRALEKWRNIIDKELEELIKNTYEERVINVAKYIVNGGKRLRGALVMLVNEALGGNPEDALPAALALELVHASSLS
IDDIIDLDFVRRGRPSAWVAKGVANTVMVSNLLIPHAIMLVKRYGKRAIDKVVEVWWEVSKGEVWDVHGPPEGKGVEAYE
AIIEAKTASMFALSAYLGGLAAGEEERLEGLWRYGFLLGKAYQIADDLKDVEGDASFSAKLFREWLKEAGKEGVLKRLKE
IVEECERIGSEFGPLLASFPRRGVELMGVKL
>Mature_271_residues
MNEIQRALEKWRNIIDKELEELIKNTYEERVINVAKYIVNGGKRLRGALVMLVNEALGGNPEDALPAALALELVHASSLS
IDDIIDLDFVRRGRPSAWVAKGVANTVMVSNLLIPHAIMLVKRYGKRAIDKVVEVWWEVSKGEVWDVHGPPEGKGVEAYE
AIIEAKTASMFALSAYLGGLAAGEEERLEGLWRYGFLLGKAYQIADDLKDVEGDASFSAKLFREWLKEAGKEGVLKRLKE
IVEECERIGSEFGPLLASFPRRGVELMGVKL

Specific function: Supplies Octaprenyl Diphosphate, The Precursor For The Side Chain Of The Isoprenoid Quinones Ubiquinone And Menaquinone. [C]

COG id: COG0142

COG function: function code H; Geranylgeranyl pyrophosphate synthase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FPP/GGPP synthase family [H]

Homologues:

Organism=Escherichia coli, GI1789578, Length=207, Percent_Identity=33.8164251207729, Blast_Score=87, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000092
- InterPro:   IPR017446
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00348 polyprenyl_synt [H]

EC number: =2.5.1.1; =2.5.1.10 [H]

Molecular weight: Translated: 30147; Mature: 30147

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00444 POLYPRENYL_SYNTHET_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEIQRALEKWRNIIDKELEELIKNTYEERVINVAKYIVNGGKRLRGALVMLVNEALGGN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PEDALPAALALELVHASSLSIDDIIDLDFVRRGRPSAWVAKGVANTVMVSNLLIPHAIML
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VKRYGKRAIDKVVEVWWEVSKGEVWDVHGPPEGKGVEAYEAIIEAKTASMFALSAYLGGL
HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AAGEEERLEGLWRYGFLLGKAYQIADDLKDVEGDASFSAKLFREWLKEAGKEGVLKRLKE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
IVEECERIGSEFGPLLASFPRRGVELMGVKL
HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCC
>Mature Secondary Structure
MNEIQRALEKWRNIIDKELEELIKNTYEERVINVAKYIVNGGKRLRGALVMLVNEALGGN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PEDALPAALALELVHASSLSIDDIIDLDFVRRGRPSAWVAKGVANTVMVSNLLIPHAIML
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VKRYGKRAIDKVVEVWWEVSKGEVWDVHGPPEGKGVEAYEAIIEAKTASMFALSAYLGGL
HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AAGEEERLEGLWRYGFLLGKAYQIADDLKDVEGDASFSAKLFREWLKEAGKEGVLKRLKE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
IVEECERIGSEFGPLLASFPRRGVELMGVKL
HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7979381 [H]